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OPENSEQ.org
L36 - S14
UniProt: Q5SHR2 - Q5SHQ1
Length: 98
Sequences: 627
Seq/Len: 6.40
I_Prob: 0.19
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cN 3v2d9 3v2eN 3v2f9Contact Map
2j002j00N 2j019 2j02N 2j039Contact Map
4juw4juwN 4jux9Contact Map
3knh3knhN 3kni9 3knjN 3knk9Contact Map
3v223v22N 3v239 3v24N 3v259Contact Map
2y102y10N 2y119 2y18N 2y199Contact Map
3zn73zn7N 3zn99 3zndN 3zne9Contact Map
3v263v26N 3v279 3v28N 3v299Contact Map
2y142y14N 2y159 2y16N 2y179Contact Map
3huw3huwN 3hux9 3huyN 3huz9Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
4_R 57_R 1.15 0.19
20_H 32_S 1.12 0.17
3_V 33_V 0.93 0.09
3_V 41_R 0.92 0.09
18_R 20_A 0.91 0.09
4_R 34_Y 0.85 0.07
20_H 53_L 0.83 0.07
21_G 51_G 0.83 0.07
9_R 16_F 0.82 0.06
10_I 49_H 0.82 0.06
8_K 51_G 0.79 0.06
18_R 31_R 0.76 0.05
31_K 40_C 0.74 0.04
15_K 25_V 0.70 0.04
29_N 47_L 0.70 0.04
5_A 24_C 0.69 0.04
17_I 20_A 0.66 0.03
31_K 8_E 0.65 0.03
35_R 13_T 0.65 0.03
31_K 21_Y 0.63 0.03
16_V 51_G 0.63 0.03
10_I 36_F 0.62 0.03
3_V 30_A 0.62 0.03
33_K 53_L 0.61 0.03
24_Y 30_A 0.60 0.03
10_I 35_R 0.59 0.02
16_V 42_I 0.59 0.02
17_I 6_L 0.59 0.02
5_A 12_R 0.58 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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