OPENSEQ.org
L36 - S13
UniProt: Q5SHR2 - P80377
Length: 163
Sequences: 753
Seq/Len: 4.68
I_Prob: 0.15
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cM 3v2d9 3v2eM 3v2f9Contact Map
2j002j00M 2j019 2j02M 2j039Contact Map
4juw4juwM 4jux9Contact Map
4kix4kix4 4kiyM 4kiz4 4kj0M 4kj14 4kj2M 4kj34 4kj4MContact Map
4kj54kj54 4kj6M 4kj74 4kj8M 4kj94 4kjaM 4kjb4 4kjcMContact Map
4gd13r8s4 3r8t4 4gd1M 4gd2MContact Map
3knh3knhM 3kni9 3knjM 3knk9Contact Map
3v223v22M 3v239 3v24M 3v259Contact Map
3ofo3ofoM 3ofpM 3ofq4 3ofr4Contact Map
2y102y10M 2y119 2y18M 2y199Contact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
22_R 90_L 1.15 0.15
35_R 54_V 1.05 0.11
18_R 76_A 1.00 0.09
31_K 59_Y 0.95 0.08
27_C 48_L 0.91 0.07
32_H 48_L 0.91 0.07
30_P 66_L 0.90 0.07
11_C 48_L 0.87 0.06
37_G 72_A 0.85 0.06
31_K 86_C 0.85 0.05
31_K 4_I 0.81 0.05
15_K 111_K 0.77 0.04
29_N 84_I 0.76 0.04
16_V 77_N 0.76 0.04
8_K 51_A 0.76 0.04
10_I 113_P 0.76 0.04
17_I 121_K 0.76 0.04
5_A 57_R 0.75 0.04
25_V 95_G 0.71 0.03
10_I 115_K 0.70 0.03
22_R 75_A 0.69 0.03
20_H 29_R 0.68 0.03
4_R 79_K 0.68 0.03
35_R 50_E 0.67 0.03
20_H 119_G 0.67 0.03
12_D 77_N 0.66 0.03
28_E 58_E 0.65 0.03
25_V 94_R 0.65 0.03
18_R 118_A 0.65 0.03
18_R 31_K 0.64 0.02
18_R 79_K 0.63 0.02
29_N 8_E 0.62 0.02
15_K 94_R 0.62 0.02
2_K 51_A 0.61 0.02
5_A 111_K 0.60 0.02
8_K 20_T 0.60 0.02
9_R 119_G 0.60 0.02
29_N 21_Y 0.60 0.02
5_A 110_R 0.60 0.02
35_R 59_Y 0.59 0.02
9_R 56_L 0.59 0.02
18_R 117_V 0.59 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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