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OPENSEQ.org
L36 - S11
UniProt: Q5SHR2 - P80376
Length: 166
Sequences: 636
Seq/Len: 3.88
I_Prob: 0.16
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cK 3v2d9 3v2eK 3v2f9Contact Map
2j002j00K 2j019 2j02K 2j039Contact Map
4juw4juwK 4jux9Contact Map
4kix4kix4 4kiyK 4kiz4 4kj0K 4kj14 4kj2K 4kj34 4kj4KContact Map
4kj54kj54 4kj6K 4kj74 4kj8K 4kj94 4kjaK 4kjb4 4kjcKContact Map
4gd13r8s4 3r8t4 4gd1K 4gd2KContact Map
3knh3knhK 3kni9 3knjK 3knk9Contact Map
3v223v22K 3v239 3v24K 3v259Contact Map
3ofo3ofoK 3ofpK 3ofq4 3ofr4Contact Map
2y102y10K 2y119 2y18K 2y199Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
4_R 94_A 1.18 0.16
23_V 5_P 1.13 0.14
22_R 104_Q 1.13 0.14
10_I 59_Y 1.06 0.11
26_I 108_I 1.06 0.11
5_A 93_Q 1.02 0.10
24_Y 73_M 1.02 0.10
22_R 99_Q 1.00 0.09
35_R 31_T 1.00 0.09
25_V 9_K 0.98 0.09
17_I 67_D 0.91 0.07
21_G 105_V 0.90 0.07
27_C 28_T 0.88 0.06
29_N 91_R 0.86 0.06
37_G 122_K 0.85 0.06
4_R 45_G 0.84 0.05
18_R 31_T 0.82 0.05
31_K 15_A 0.81 0.05
32_H 28_T 0.80 0.04
20_H 93_Q 0.80 0.04
34_Q 21_I 0.80 0.04
18_R 23_A 0.79 0.04
4_R 5_P 0.79 0.04
5_A 48_I 0.78 0.04
24_Y 104_Q 0.77 0.04
24_Y 56_G 0.76 0.04
18_R 22_H 0.75 0.04
31_K 95_I 0.74 0.04
18_R 107_S 0.74 0.04
32_H 34_D 0.73 0.03
12_D 99_Q 0.73 0.03
18_R 17_G 0.72 0.03
21_G 72_A 0.72 0.03
27_C 34_D 0.71 0.03
37_G 49_G 0.71 0.03
32_H 38_N 0.71 0.03
33_K 19_A 0.70 0.03
15_K 53_S 0.70 0.03
24_Y 99_Q 0.70 0.03
16_V 36_D 0.70 0.03
35_R 93_Q 0.70 0.03
31_K 16_S 0.69 0.03
30_P 116_H 0.69 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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