OPENSEQ.org
L36 - S04
UniProt: Q5SHR2 - P80373
Length: 246
Sequences: 908
Seq/Len: 3.72
I_Prob: 0.23
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cD 3v2d9 3v2eD 3v2f9Contact Map
2j002j00D 2j019 2j02D 2j039Contact Map
4juw4juwD 4jux9Contact Map
4kix4kix4 4kiyD 4kiz4 4kj0D 4kj14 4kj2D 4kj34 4kj4DContact Map
4kj54kj54 4kj6D 4kj74 4kj8D 4kj94 4kjaD 4kjb4 4kjcDContact Map
4gd13r8s4 3r8t4 4gd1D 4gd2DContact Map
3knh3knhD 3kni9 3knjD 3knk9Contact Map
3v223v22D 3v239 3v24D 3v259Contact Map
3ofo3ofoD 3ofpD 3ofq4 3ofr4Contact Map
2y102y10D 2y119 2y18D 2y199Contact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
18_R 156_E 1.23 0.23
31_K 151_K 1.04 0.13
4_R 45_Q 1.00 0.11
15_K 132_R 0.91 0.08
31_K 168_R 0.88 0.07
18_R 70_I 0.85 0.07
21_G 130_G 0.84 0.07
17_I 192_E 0.80 0.06
10_I 11_L 0.79 0.05
30_P 16_G 0.78 0.05
29_N 133_V 0.74 0.04
9_R 8_V 0.73 0.04
4_R 23_G 0.72 0.04
29_N 125_H 0.72 0.04
31_K 9_C 0.72 0.04
31_K 172_P 0.70 0.04
15_K 208_S 0.69 0.03
16_V 111_A 0.68 0.03
31_K 18_K 0.67 0.03
10_I 196_L 0.67 0.03
18_R 39_P 0.66 0.03
16_V 37_P 0.66 0.03
5_A 81_E 0.65 0.03
8_K 73_R 0.65 0.03
9_R 80_E 0.65 0.03
31_K 179_E 0.64 0.03
35_R 91_S 0.64 0.03
5_A 103_N 0.63 0.03
16_V 177_D 0.62 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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