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OPENSEQ.org
L36 - S03
UniProt: Q5SHR2 - P80372
Length: 276
Sequences: 795
Seq/Len: 3.21
I_Prob: 0.29
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cC 3v2d9 3v2eC 3v2f9Contact Map
2j002j00C 2j019 2j02C 2j039Contact Map
4juw4juwC 4jux9Contact Map
4kix4kix4 4kiyC 4kiz4 4kj0C 4kj14 4kj2C 4kj34 4kj4CContact Map
4kj54kj54 4kj6C 4kj74 4kj8C 4kj94 4kjaC 4kjb4 4kjcCContact Map
4gd13r8s4 3r8t4 4gd1C 4gd2CContact Map
3knh3knhC 3kni9 3knjC 3knk9Contact Map
3v223v22C 3v239 3v24C 3v259Contact Map
3ofo3ofoC 3ofpC 3ofq4 3ofr4Contact Map
2y102y10C 2y119 2y18C 2y199Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
20_H 135_K 1.29 0.29
31_K 150_K 1.15 0.20
18_R 41_G 1.14 0.20
9_R 6_H 1.13 0.19
22_R 196_L 1.12 0.19
4_R 26_K 1.12 0.19
31_K 104_Q 1.04 0.15
17_I 5_I 1.03 0.14
26_I 131_R 0.98 0.12
30_P 3_N 0.97 0.11
9_R 169_A 0.96 0.11
31_K 19_E 0.95 0.11
35_R 172_R 0.91 0.09
17_I 120_V 0.90 0.09
18_R 49_S 0.88 0.08
18_R 109_P 0.87 0.08
5_A 103_V 0.87 0.08
30_P 166_E 0.87 0.08
18_R 93_K 0.83 0.07
5_A 209_G 0.82 0.07
12_D 136_Q 0.81 0.06
31_K 62_D 0.81 0.06
21_G 183_D 0.80 0.06
10_I 56_D 0.80 0.06
35_R 131_R 0.78 0.06
3_V 200_A 0.78 0.06
9_R 86_V 0.78 0.06
22_R 108_N 0.78 0.06
10_I 34_L 0.76 0.05
2_K 13_G 0.76 0.05
10_I 210_G 0.74 0.05
31_K 64_V 0.74 0.05
29_N 35_E 0.74 0.05
3_V 198_V 0.73 0.05
17_I 55_V 0.73 0.04
28_E 165_T 0.72 0.04
4_R 13_G 0.72 0.04
5_A 208_I 0.71 0.04
20_H 128_F 0.71 0.04
18_R 149_A 0.71 0.04
8_K 142_M 0.70 0.04
25_V 39_I 0.70 0.04
4_R 101_L 0.70 0.04
5_A 68_V 0.70 0.04
15_K 205_G 0.69 0.04
13_K 82_E 0.69 0.04
22_R 92_A 0.69 0.04
5_A 33_L 0.69 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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