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OPENSEQ.org
L15 - S05
UniProt: Q5SHQ7 - Q5SHQ5
Length: 312
Sequences: 1339
Seq/Len: 4.46
I_Prob: 0.10
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cE 3v2dP 3v2eE 3v2fPContact Map
2j002j00E 2j01P 2j02E 2j03PContact Map
4juw4juwE 4juxPContact Map
4kix4kixL 4kiyE 4kizL 4kj0E 4kj1L 4kj2E 4kj3L 4kj4EContact Map
4kj54kj5L 4kj6E 4kj7L 4kj8E 4kj9L 4kjaE 4kjbL 4kjcEContact Map
3ohc3ohcE 3ohdE 3ohjP 3ohkPContact Map
3knh3knhE 3kniP 3knjE 3knkPContact Map
3uz63uz6H 3uz7H 3uz8O 3uz9OContact Map
3oge3ogeE 3ogyE 3oh5P 3oh7PContact Map
3uyd3uydH 3uyeO 3uyfH 3uygOContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
87_D 138_A 1.12 0.10
19_V 133_Y 0.92 0.05
24_G 86_A 0.90 0.05
137_K 90_V 0.85 0.04
122_P 29_G 0.85 0.04
9_N 69_V 0.82 0.04
6_L 115_V 0.80 0.04
3_L 85_G 0.80 0.04
123_L 150_R 0.79 0.03
106_L 141_Q 0.77 0.03
106_L 41_V 0.77 0.03
77_R 70_P 0.72 0.03
137_K 58_A 0.72 0.03
29_K 52_P 0.71 0.03
145_P 100_V 0.71 0.03
135_L 155_E 0.71 0.03
1_M 27_R 0.70 0.02
32_T 8_E 0.70 0.02
117_E 154_G 0.70 0.02
108_K 133_Y 0.69 0.02
31_A 49_P 0.69 0.02
112_L 96_P 0.69 0.02
112_L 140_R 0.69 0.02
95_V 120_T 0.68 0.02
51_F 112_L 0.68 0.02
125_V 67_V 0.68 0.02
106_L 64_R 0.67 0.02
136_E 80_I 0.66 0.02
95_V 75_T 0.65 0.02
96_T 136_M 0.65 0.02
21_R 149_E 0.65 0.02
85_L 140_R 0.65 0.02
59_L 86_A 0.64 0.02
5_D 138_A 0.64 0.02
42_S 110_L 0.64 0.02
24_G 109_I 0.63 0.02
79_R 141_Q 0.63 0.02
97_P 76_I 0.63 0.02
144_E 4_T 0.62 0.02
132_K 88_K 0.61 0.02
51_F 138_A 0.61 0.02
14_K 96_P 0.61 0.02
12_A 125_S 0.60 0.02
137_K 127_N 0.60 0.02
104_G 36_D 0.60 0.02
68_Q 123_L 0.60 0.02
17_K 95_A 0.60 0.01
86_K 71_L 0.59 0.01
65_R 53_L 0.59 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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