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OPENSEQ.org
L15 - L18
UniProt: Q5SHQ7 - Q5SHQ4
Length: 262
Sequences: 1318
Seq/Len: 5.21
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoLONContact Map
1vq81vq8LONContact Map
1vqp1vqpLONContact Map
1vqm1vqmLONContact Map
1vql1vqlLONContact Map
1vqk1vqkLONContact Map
1yhq1yhqLONContact Map
1s721s72LONContact Map
1vq91vq9LONContact Map
1vqn1vqnLONContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
40_S 32_L 0.84 0.00
42_S 98_V 0.83 0.00
121_K 79_A 0.83 0.00
36_K 74_A 0.82 0.00
63_P 74_A 0.78 0.00
50_R 93_K 0.72 0.00
29_K 104_G 0.72 0.00
32_T 10_R 0.71 0.00
33_R 100_A 0.70 0.00
104_G 23_R 0.69 0.00
120_A 98_V 0.68 0.00
23_P 10_R 0.68 0.00
136_E 14_V 0.67 0.00
102_R 22_G 0.66 0.00
64_K 69_V 0.64 0.00
84_N 31_S 0.63 0.00
115_L 42_D 0.63 0.00
110_Y 59_K 0.62 0.00
16_R 40_I 0.61 0.00
19_V 60_G 0.61 0.00
50_R 32_L 0.60 0.00
59_L 104_G 0.60 0.00
21_R 30_R 0.60 0.00
131_S 45_G 0.60 0.00
55_R 91_P 0.60 0.00
87_D 63_T 0.60 0.00
60_M 36_Y 0.59 0.00
77_R 68_Q 0.59 0.00
148_L 8_E 0.58 0.00
86_K 33_K 0.58 0.00
56_S 77_A 0.57 0.00
42_S 104_G 0.57 0.00
131_S 55_A 0.57 0.00
64_K 65_V 0.57 0.00
131_S 108_G 0.56 0.00
117_E 56_L 0.56 0.00
18_R 77_A 0.56 0.00
59_L 32_L 0.56 0.00
63_P 110_L 0.56 0.00
122_P 79_A 0.56 0.00
66_G 7_Y 0.55 0.00
84_N 41_D 0.55 0.00
89_A 27_S 0.55 0.00
129_A 16_N 0.55 0.00
47_D 66_A 0.55 0.00
105_L 104_G 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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