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OPENSEQ.org
L15 - S04
UniProt: Q5SHQ7 - P80373
Length: 359
Sequences: 1242
Seq/Len: 3.54
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cD 3v2dP 3v2eD 3v2fPContact Map
2j002j00D 2j01P 2j02D 2j03PContact Map
4juw4juwD 4juxPContact Map
4kix4kixL 4kiyD 4kizL 4kj0D 4kj1L 4kj2D 4kj3L 4kj4DContact Map
4kj54kj5L 4kj6D 4kj7L 4kj8D 4kj9L 4kjaD 4kjbL 4kjcDContact Map
3knh3knhD 3kniP 3knjD 3knkPContact Map
3ohc3ohcD 3ohdD 3ohjP 3ohkPContact Map
3uz63uz6G 3uz7G 3uz8O 3uz9OContact Map
3u5b3u5cEJ 3u5ea 3u5gEJ 3u5iaContact Map
3oge3ogeD 3ogyD 3oh5P 3oh7PContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
95_V 209_R 0.90 0.00
85_L 154_N 0.88 0.00
23_P 208_S 0.79 0.00
38_Q 147_A 0.74 0.00
24_G 91_S 0.74 0.00
19_V 127_T 0.73 0.00
40_S 17_V 0.71 0.00
88_L 142_P 0.69 0.00
32_T 15_E 0.69 0.00
27_H 10_R 0.69 0.00
80_Y 147_A 0.69 0.00
91_F 180_G 0.69 0.00
6_L 69_G 0.65 0.00
129_A 198_V 0.65 0.00
110_Y 146_I 0.63 0.00
89_A 65_R 0.63 0.00
19_V 108_L 0.62 0.00
33_R 145_E 0.62 0.00
17_K 76_R 0.62 0.00
114_I 5_I 0.61 0.00
29_K 193_D 0.61 0.00
33_R 47_R 0.61 0.00
136_E 151_K 0.60 0.00
49_R 48_A 0.60 0.00
113_K 20_Y 0.59 0.00
93_G 108_L 0.59 0.00
19_V 180_G 0.58 0.00
15_R 174_L 0.58 0.00
144_E 113_S 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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