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OPENSEQ.org
L15 - S03
UniProt: Q5SHQ7 - P80372
Length: 389
Sequences: 1228
Seq/Len: 3.47
I_Prob: 0.06
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cC 3v2dP 3v2eC 3v2fPContact Map
2j002j00C 2j01P 2j02C 2j03PContact Map
4juw4juwC 4juxPContact Map
4kix4kixL 4kiyC 4kizL 4kj0C 4kj1L 4kj2C 4kj3L 4kj4CContact Map
4kj54kj5L 4kj6C 4kj7L 4kj8C 4kj9L 4kjaC 4kjbL 4kjcCContact Map
3ohc3ohcC 3ohdC 3ohjP 3ohkPContact Map
3knh3knhC 3kniP 3knjC 3knkPContact Map
3uz63uz6F 3uz7F 3uz8O 3uz9OContact Map
3u5b3u5cD 3u5ea 3u5gD 3u5iaContact Map
3oge3ogeC 3ogyC 3oh5P 3oh7PContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
33_R 143_E 1.12 0.06
131_S 66_V 1.11 0.06
88_L 113_A 1.04 0.05
38_Q 84_I 0.95 0.04
13_N 168_A 0.84 0.03
79_R 6_H 0.83 0.02
76_K 161_E 0.83 0.02
92_E 52_L 0.82 0.02
83_V 66_V 0.82 0.02
144_E 141_V 0.82 0.02
127_A 97_K 0.80 0.02
5_D 162_Q 0.78 0.02
35_H 129_A 0.77 0.02
56_S 134_I 0.76 0.02
112_L 56_D 0.76 0.02
86_K 66_V 0.76 0.02
23_P 162_Q 0.76 0.02
122_P 6_H 0.76 0.02
60_M 118_Q 0.75 0.02
77_R 52_L 0.74 0.02
121_K 124_I 0.72 0.02
62_L 43_L 0.72 0.02
136_E 39_I 0.71 0.02
137_K 51_G 0.71 0.02
61_R 168_A 0.71 0.02
27_H 16_R 0.71 0.02
102_R 41_G 0.71 0.02
82_G 68_V 0.70 0.02
137_K 185_G 0.70 0.01
1_M 18_W 0.68 0.01
137_K 176_H 0.68 0.01
29_K 147_K 0.67 0.01
85_L 109_P 0.67 0.01
15_R 106_V 0.67 0.01
113_K 106_V 0.67 0.01
102_R 141_V 0.66 0.01
61_R 14_I 0.66 0.01
8_P 58_E 0.66 0.01
148_L 202_I 0.66 0.01
35_H 67_T 0.66 0.01
56_S 128_F 0.65 0.01
6_L 133_A 0.65 0.01
104_G 27_K 0.65 0.01
26_G 101_L 0.65 0.01
12_A 89_E 0.65 0.01
90_R 45_K 0.65 0.01
29_K 72_K 0.65 0.01
92_E 150_K 0.64 0.01
127_A 129_A 0.64 0.01
118_G 71_A 0.64 0.01
133_S 23_Y 0.63 0.01
57_T 3_N 0.63 0.01
11_G 102_N 0.63 0.01
64_K 168_A 0.63 0.01
130_F 35_E 0.63 0.01
136_E 120_V 0.62 0.01
112_L 198_V 0.62 0.01
144_E 187_A 0.62 0.01
23_P 151_V 0.62 0.01
83_V 126_R 0.62 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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