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OPENSEQ.org
L30 - S16
UniProt: Q5SHQ6 - Q5SJH3
Length: 148
Sequences: 1009
Seq/Len: 6.96
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cP 3v2d3 3v2eP 3v2f3Contact Map
2j002j00P 2j013 2j02P 2j033Contact Map
4juw4juwP 4jux3Contact Map
4kix4kixZ 4kiyP 4kizZ 4kj0P 4kj1Z 4kj2P 4kj3Z 4kj4PContact Map
4kj54kj5Z 4kj6P 4kj7Z 4kj8P 4kj9Z 4kjaP 4kjbZ 4kjcPContact Map
3ohc3ohcP 3ohdP 3ohj3 3ohk3Contact Map
3knh3knhP 3kni3 3knjP 3knk3Contact Map
3uz63uz6S 3uz7S 3uz8X 3uz9XContact Map
3oge3ogeP 3ogyP 3oh53 3oh73Contact Map
3uyd3uydS 3uyeX 3uyfS 3uygXContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
53_L 18_R 0.74 0.00
11_S 22_T 0.69 0.00
35_R 36_I 0.67 0.00
17_K 36_I 0.67 0.00
9_V 41_P 0.65 0.00
53_L 67_T 0.64 0.00
55_R 82_Q 0.63 0.00
35_R 2_V 0.61 0.00
57_E 72_R 0.61 0.00
10_K 73_L 0.60 0.00
32_Q 27_K 0.59 0.00
35_R 21_V 0.58 0.00
36_V 52_D 0.58 0.00
53_L 65_Q 0.58 0.00
9_V 65_Q 0.57 0.00
42_A 80_F 0.55 0.00
15_Y 40_D 0.55 0.00
5_K 83_E 0.52 0.00
52_H 78_G 0.50 0.00
48_E 2_V 0.50 0.00
51_A 42_R 0.49 0.00
52_H 1_M 0.49 0.00
29_R 50_K 0.48 0.00
31_L 55_R 0.48 0.00
22_A 72_R 0.48 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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