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OPENSEQ.org
L30 - S19
UniProt: Q5SHQ6 - Q5SHP2
Length: 153
Sequences: 812
Seq/Len: 5.41
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cS 3v2d3 3v2eS 3v2f3Contact Map
2j002j00S 2j013 2j02S 2j033Contact Map
4juw4juwS 4jux3Contact Map
4kix4kixZ 4kiyS 4kizZ 4kj0S 4kj1Z 4kj2S 4kj3Z 4kj4SContact Map
4kj54kj5Z 4kj6S 4kj7Z 4kj8S 4kj9Z 4kjaS 4kjbZ 4kjcSContact Map
3ohc3ohcS 3ohdS 3ohj3 3ohk3Contact Map
3knh3knhS 3kni3 3knjS 3knk3Contact Map
3uz63uz6V 3uz7V 3uz8X 3uz9XContact Map
3oge3ogeS 3ogyS 3oh53 3oh73Contact Map
3uyd3uydV 3uyeX 3uyfV 3uygXContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
52_H 76_P 0.93 0.01
19_Q 76_P 0.86 0.01
56_V 40_I 0.84 0.01
32_Q 52_Y 0.84 0.01
23_L 76_P 0.84 0.01
39_D 57_H 0.78 0.01
8_L 65_N 0.78 0.01
3_R 63_T 0.76 0.01
50_V 64_E 0.73 0.01
31_L 2_P 0.73 0.01
17_K 10_F 0.70 0.01
56_V 69_H 0.69 0.01
52_H 30_L 0.65 0.00
3_R 78_R 0.64 0.00
50_V 75_A 0.64 0.00
19_Q 30_L 0.64 0.00
11_S 78_R 0.63 0.00
42_A 50_A 0.62 0.00
44_R 57_H 0.62 0.00
48_E 49_I 0.61 0.00
24_K 44_M 0.60 0.00
13_I 78_R 0.59 0.00
33_Q 80_Y 0.59 0.00
33_Q 2_P 0.58 0.00
8_L 45_V 0.58 0.00
50_V 74_F 0.58 0.00
15_Y 70_K 0.58 0.00
53_L 30_L 0.57 0.00
49_K 57_H 0.56 0.00
48_E 80_Y 0.55 0.00
28_L 87_A 0.55 0.00
60_E 78_R 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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