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OPENSEQ.org
L30 - S11
UniProt: Q5SHQ6 - P80376
Length: 189
Sequences: 748
Seq/Len: 4.00
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cK 3v2d3 3v2eK 3v2f3Contact Map
2j002j00K 2j013 2j02K 2j033Contact Map
4juw4juwK 4jux3Contact Map
4kix4kixZ 4kiyK 4kizZ 4kj0K 4kj1Z 4kj2K 4kj3Z 4kj4KContact Map
4kj54kj5Z 4kj6K 4kj7Z 4kj8K 4kj9Z 4kjaK 4kjbZ 4kjcKContact Map
3ohc3ohcK 3ohdK 3ohj3 3ohk3Contact Map
3knh3knhK 3kni3 3knjK 3knk3Contact Map
3uz63uz6N 3uz7N 3uz8X 3uz9XContact Map
3oge3ogeK 3ogyK 3oh53 3oh73Contact Map
3uyd3uydN 3uyeX 3uyfN 3uygXContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
31_L 7_K 0.90 0.00
42_A 33_T 0.88 0.00
52_H 40_I 0.86 0.00
48_E 59_Y 0.83 0.00
54_V 112_T 0.83 0.00
37_L 95_I 0.81 0.00
30_R 67_D 0.77 0.00
46_N 29_I 0.76 0.00
46_N 30_V 0.74 0.00
3_R 59_Y 0.72 0.00
21_A 77_M 0.72 0.00
19_Q 70_K 0.72 0.00
42_A 66_L 0.72 0.00
52_H 70_K 0.71 0.00
25_A 95_I 0.71 0.00
33_Q 1_M 0.71 0.00
51_A 59_Y 0.71 0.00
6_V 100_A 0.69 0.00
2_P 3_K 0.69 0.00
1_M 101_S 0.69 0.00
50_V 111_D 0.69 0.00
4_L 94_A 0.68 0.00
1_M 21_I 0.68 0.00
12_P 39_P 0.68 0.00
53_L 114_V 0.67 0.00
58_V 84_V 0.67 0.00
36_V 105_V 0.67 0.00
38_E 80_V 0.67 0.00
33_Q 32_I 0.67 0.00
40_T 7_K 0.66 0.00
40_T 9_K 0.66 0.00
11_S 45_G 0.66 0.00
39_D 8_K 0.66 0.00
16_P 31_T 0.66 0.00
23_L 103_L 0.66 0.00
53_L 69_A 0.65 0.00
31_L 43_S 0.65 0.00
15_Y 82_V 0.65 0.00
15_Y 14_V 0.65 0.00
29_R 5_P 0.65 0.00
17_K 82_V 0.65 0.00
8_L 15_A 0.64 0.00
43_I 36_D 0.63 0.00
23_L 92_E 0.63 0.00
14_G 119_C 0.63 0.00
15_Y 68_A 0.63 0.00
51_A 79_S 0.62 0.00
20_K 14_V 0.62 0.00
48_E 44_S 0.62 0.00
36_V 45_G 0.62 0.00
19_Q 59_Y 0.61 0.00
59_V 51_K 0.61 0.00
14_G 56_G 0.61 0.00
47_V 62_Q 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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