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OPENSEQ.org
L30 - L34
UniProt: Q5SHQ6 - P80340
Length: 109
Sequences: 804
Seq/Len: 7.66
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d37 3v2f37Contact Map
2j002j0137 2j0337Contact Map
4juw4jux37Contact Map
4kix4kixZ2 4kizZ2 4kj1Z2 4kj3Z2Contact Map
4kj54kj5Z2 4kj7Z2 4kj9Z2 4kjbZ2Contact Map
2zjr2zjrW2Contact Map
4btc4btd37Contact Map
3uyd3uyeX7 3uygX7Contact Map
4gd13r8sZ2 3r8tZ2Contact Map
3ohc3ohj37 3ohk37Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
53_L 9_R 0.99 0.03
7_K 37_K 0.83 0.02
8_L 33_R 0.77 0.01
9_V 28_R 0.76 0.01
20_K 5_W 0.74 0.01
49_K 40_W 0.74 0.01
9_V 8_N 0.69 0.01
51_A 12_R 0.68 0.01
8_L 24_T 0.68 0.01
42_A 15_T 0.66 0.01
49_K 16_H 0.66 0.01
38_E 8_N 0.61 0.01
15_Y 1_M 0.61 0.01
42_A 33_R 0.60 0.01
14_G 14_K 0.60 0.01
22_A 44_P 0.58 0.01
39_D 25_P 0.58 0.01
27_G 22_M 0.57 0.01
46_N 41_R 0.57 0.01
14_G 28_R 0.56 0.01
15_Y 10_R 0.56 0.01
20_K 44_P 0.56 0.01
2_P 20_A 0.55 0.01
29_R 30_V 0.54 0.01
53_L 5_W 0.54 0.01
52_H 15_T 0.53 0.01
8_L 32_K 0.53 0.01
11_S 14_K 0.52 0.01
25_A 15_T 0.52 0.01
42_A 22_M 0.51 0.01
14_G 33_R 0.50 0.01
51_A 31_L 0.50 0.01
20_K 30_V 0.50 0.01
29_R 11_K 0.49 0.01
51_A 26_G 0.49 0.01
54_V 11_K 0.49 0.01
9_V 10_R 0.48 0.01
17_K 9_R 0.48 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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