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OPENSEQ.org
S05 - S08
UniProt: Q5SHQ5 - Q5SHQ2
Length: 300
Sequences: 1386
Seq/Len: 4.83
I_Prob: 0.52
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeEHContact Map
3v2c3v2cEH 3v2eEHContact Map
2uub2uubEHContact Map
2j002j00EH 2j02EHContact Map
3t1y3t1yEHContact Map
4juw4juwEHContact Map
2uua2uuaEHContact Map
4b3m4b3mEHContact Map
2uxc2uxcEHContact Map
4kix4kiyEH 4kj0EH 4kj2EH 4kj4EHContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
143_R 81_H 1.31 0.52
151_L 81_H 1.27 0.48
83_E 45_I 1.04 0.28
106_P 137_V 1.01 0.26
79_E 105_R 0.86 0.15
86_A 9_M 0.86 0.15
68_E 46_K 0.86 0.15
156_A 99_E 0.85 0.14
24_R 105_R 0.84 0.14
147_D 75_R 0.81 0.12
71_L 48_Y 0.80 0.12
125_S 120_T 0.79 0.11
18_R 14_R 0.77 0.10
95_A 134_I 0.77 0.10
115_V 124_A 0.77 0.10
68_E 6_I 0.77 0.10
17_A 53_V 0.76 0.10
91_L 86_I 0.75 0.10
151_L 138_W 0.75 0.10
123_L 16_A 0.75 0.10
115_V 13_I 0.74 0.09
84_F 59_L 0.74 0.09
58_A 76_P 0.73 0.09
100_V 57_P 0.73 0.09
143_R 44_F 0.72 0.09
67_V 61_V 0.71 0.08
151_L 79_V 0.70 0.08
159_Q 19_V 0.70 0.08
9_K 56_K 0.70 0.08
127_N 135_C 0.69 0.07
151_L 77_E 0.69 0.07
143_R 86_I 0.69 0.07
121_K 92_R 0.69 0.07
58_A 79_V 0.69 0.07
15_R 132_E 0.69 0.07
141_Q 77_E 0.68 0.07
4_T 93_V 0.67 0.07
96_P 60_R 0.67 0.07
3_E 25_D 0.67 0.07
79_E 100_I 0.67 0.07
147_D 77_E 0.67 0.07
27_R 40_A 0.66 0.06
124_G 86_I 0.66 0.06
146_A 77_E 0.66 0.06
154_G 41_R 0.66 0.06
10_M 83_I 0.65 0.06
61_Y 91_R 0.65 0.06
13_I 12_R 0.65 0.06
148_V 28_A 0.65 0.06
17_A 23_S 0.65 0.06
109_I 23_S 0.64 0.06
101_I 55_G 0.64 0.06
145_K 48_Y 0.64 0.06
70_P 64_K 0.64 0.06
151_L 78_Q 0.64 0.06
157_H 98_K 0.64 0.06
153_K 66_G 0.64 0.06
16_T 91_R 0.63 0.06
143_R 104_R 0.63 0.06
95_A 44_F 0.63 0.06
3_E 96_G 0.63 0.06
27_R 96_G 0.62 0.05
74_G 75_R 0.62 0.05
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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