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OPENSEQ.org
S05 - S13
UniProt: Q5SHQ5 - P80377
Length: 288
Sequences: 1312
Seq/Len: 4.69
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeEMContact Map
3v2c3v2cEM 3v2eEMContact Map
2uub2uubEMContact Map
2j002j00EM 2j02EMContact Map
3t1y3t1yEMContact Map
4juw4juwEMContact Map
2uua2uuaEMContact Map
4b3m4b3mEMContact Map
2uxc2uxcEMContact Map
4kix4kiyEM 4kj0EM 4kj2EM 4kj4EMContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
58_A 41_P 1.05 0.04
77_P 8_E 1.04 0.04
4_T 117_V 0.99 0.04
87_S 94_R 0.94 0.03
80_I 22_I 0.88 0.03
145_K 50_E 0.85 0.02
31_L 44_R 0.82 0.02
4_T 59_Y 0.81 0.02
52_P 113_P 0.81 0.02
60_Y 122_K 0.79 0.02
155_E 62_N 0.79 0.02
137_E 31_K 0.78 0.02
6_F 51_A 0.77 0.02
25_R 119_G 0.76 0.02
126_R 75_A 0.76 0.02
117_D 94_R 0.75 0.02
29_G 38_G 0.74 0.02
83_E 39_I 0.74 0.02
10_M 34_L 0.73 0.02
110_L 11_R 0.72 0.02
58_A 16_D 0.72 0.01
119_L 18_A 0.72 0.01
109_I 111_K 0.71 0.01
144_T 35_E 0.70 0.01
116_T 51_A 0.70 0.01
110_L 104_R 0.69 0.01
84_F 51_A 0.69 0.01
147_D 38_G 0.68 0.01
48_A 13_K 0.67 0.01
45_F 7_V 0.66 0.01
129_I 18_A 0.66 0.01
49_P 75_A 0.66 0.01
66_M 70_L 0.66 0.01
139_L 80_R 0.66 0.01
155_E 39_I 0.66 0.01
12_L 118_A 0.65 0.01
24_R 9_I 0.65 0.01
5_D 82_M 0.65 0.01
116_T 25_I 0.65 0.01
62_A 113_P 0.64 0.01
19_M 103_T 0.64 0.01
3_E 58_E 0.64 0.01
154_G 43_T 0.63 0.01
54_A 33_A 0.62 0.01
106_P 115_K 0.62 0.01
11_I 40_N 0.62 0.01
36_D 23_Y 0.62 0.01
82_V 8_E 0.61 0.01
96_P 69_E 0.61 0.01
63_R 57_R 0.61 0.01
117_D 74_V 0.61 0.01
9_K 103_T 0.61 0.01
146_A 12_N 0.61 0.01
68_E 15_V 0.61 0.01
96_P 76_A 0.60 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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