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OPENSEQ.org
L18 - S20
UniProt: Q5SHQ4 - P80380
Length: 218
Sequences: 1318
Seq/Len: 6.76
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cT 3v2dS 3v2eT 3v2fSContact Map
2j002j00T 2j01S 2j02T 2j03SContact Map
4juw4juwT 4juxSContact Map
4kix4kixO 4kiyT 4kizO 4kj0T 4kj1O 4kj2T 4kj3O 4kj4TContact Map
4kj54kj5O 4kj6T 4kj7O 4kj8T 4kj9O 4kjaT 4kjbO 4kjcTContact Map
3knh3knhT 3kniS 3knjT 3knkSContact Map
3ohc3ohcT 3ohdT 3ohjS 3ohkSContact Map
3uz63uz6W 3uz7W 3uz8Q 3uz9QContact Map
3oge3ogeT 3ogyT 3oh5S 3oh7SContact Map
3uyd3uydW 3uyeQ 3uyfW 3uygQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
81_G 73_H 0.90 0.01
11_K 9_N 0.84 0.01
98_V 74_K 0.79 0.01
60_G 33_I 0.77 0.01
36_Y 63_I 0.67 0.00
3_R 83_R 0.66 0.00
53_S 51_E 0.66 0.00
84_Q 58_K 0.66 0.00
100_A 59_A 0.63 0.00
18_I 8_R 0.61 0.00
6_A 33_I 0.61 0.00
53_S 64_D 0.60 0.00
111_E 55_I 0.59 0.00
57_K 21_K 0.58 0.00
8_E 60_E 0.58 0.00
62_K 47_G 0.57 0.00
37_A 38_K 0.57 0.00
36_Y 12_A 0.57 0.00
97_R 73_H 0.57 0.00
104_G 90_Q 0.56 0.00
27_S 72_L 0.56 0.00
9_R 82_S 0.56 0.00
80_L 19_S 0.56 0.00
14_V 49_A 0.56 0.00
105_A 64_D 0.55 0.00
11_K 18_Q 0.55 0.00
8_E 38_K 0.54 0.00
92_Y 84_L 0.54 0.00
93_K 81_K 0.54 0.00
81_G 8_R 0.54 0.00
24_L 66_A 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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