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OPENSEQ.org
L18 - S09
UniProt: Q5SHQ4 - P80374
Length: 240
Sequences: 1222
Seq/Len: 5.22
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cI 3v2dS 3v2eI 3v2fSContact Map
2j002j00I 2j01S 2j02I 2j03SContact Map
4juw4juwI 4juxSContact Map
4kix4kixO 4kiyI 4kizO 4kj0I 4kj1O 4kj2I 4kj3O 4kj4IContact Map
4kj54kj5O 4kj6I 4kj7O 4kj8I 4kj9O 4kjaI 4kjbO 4kjcIContact Map
3ohc3ohcI 3ohdI 3ohjS 3ohkSContact Map
3knh3knhI 3kniS 3knjI 3knkSContact Map
3uz63uz6L 3uz7L 3uz8Q 3uz9QContact Map
3oge3ogeI 3ogyI 3oh5S 3oh7SContact Map
3uyd3uydL 3uyeQ 3uyfL 3uygQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
10_R 79_L 0.92 0.01
54_L 101_F 0.82 0.01
17_R 56_L 0.80 0.01
98_V 88_Y 0.79 0.01
76_K 14_V 0.79 0.01
93_K 97_K 0.75 0.01
24_L 117_H 0.75 0.01
86_A 114_Y 0.74 0.01
66_A 41_V 0.73 0.01
112_F 89_N 0.72 0.01
10_R 7_T 0.72 0.00
69_V 57_G 0.71 0.00
101_L 7_T 0.70 0.00
14_V 70_K 0.67 0.00
93_K 78_K 0.67 0.00
76_K 121_R 0.66 0.00
12_F 63_I 0.65 0.00
99_K 33_F 0.65 0.00
13_R 18_F 0.65 0.00
10_R 18_F 0.64 0.00
5_T 51_R 0.63 0.00
33_K 125_Y 0.62 0.00
18_I 121_R 0.62 0.00
86_A 109_V 0.61 0.00
83_K 30_G 0.61 0.00
95_H 60_D 0.60 0.00
23_R 61_A 0.60 0.00
50_S 28_V 0.59 0.00
90_G 62_Y 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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