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OPENSEQ.org
L18 - L34
UniProt: Q5SHQ4 - P80340
Length: 161
Sequences: 1030
Seq/Len: 6.64
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dS7 3v2fS7Contact Map
2j002j01S7 2j03S7Contact Map
4juw4juxS7Contact Map
4kix4kixO2 4kizO2 4kj1O2 4kj3O2Contact Map
4kj54kj5O2 4kj7O2 4kj9O2 4kjbO2Contact Map
2zjr2zjrL2Contact Map
4btc4btdS7Contact Map
3uyd3uyeQ7 3uygQ7Contact Map
4gd13r8sO2 3r8tO2Contact Map
3ohc3ohjS7 3ohkS7Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
10_R 45_A 0.91 0.01
91_P 37_K 0.87 0.01
11_K 8_N 0.87 0.01
99_K 8_N 0.86 0.01
10_R 14_K 0.85 0.01
39_I 26_G 0.81 0.01
61_N 19_R 0.78 0.01
45_G 7_P 0.77 0.01
81_G 9_R 0.77 0.01
5_T 9_R 0.71 0.01
92_Y 8_N 0.69 0.00
22_G 24_T 0.65 0.00
12_F 41_R 0.65 0.00
23_R 12_R 0.64 0.00
87_F 41_R 0.62 0.00
53_S 29_K 0.62 0.00
111_E 31_L 0.62 0.00
92_Y 16_H 0.61 0.00
4_L 3_R 0.60 0.00
48_L 31_L 0.59 0.00
17_R 20_A 0.59 0.00
112_F 19_R 0.57 0.00
29_F 33_R 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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