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OPENSEQ.org
L18 - L32
UniProt: Q5SHQ4 - P80339
Length: 172
Sequences: 991
Seq/Len: 5.93
I_Prob: 0.40
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dS5 3v2fS5Contact Map
2j002j01S5 2j03S5Contact Map
4juw4juxS5Contact Map
4kix4kixO0 4kizO0 4kj1O0 4kj3O0Contact Map
4kj54kj5O0 4kj7O0 4kj9O0 4kjbO0Contact Map
2zjr2zjrLZContact Map
4btc4btdS5Contact Map
3uyd3uyeQ5 3uygQ5Contact Map
4gd13r8sO0 3r8tO0Contact Map
3ohc3ohjS5 3ohkS5Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
10_R 6_V 1.25 0.40
92_Y 16_R 1.00 0.21
39_I 53_A 1.00 0.20
7_Y 22_H 0.78 0.09
10_R 5_P 0.77 0.09
27_S 13_K 0.77 0.09
32_L 35_E 0.75 0.08
9_R 17_D 0.75 0.08
53_S 11_T 0.74 0.08
24_L 7_P 0.73 0.07
32_L 48_E 0.72 0.07
3_R 5_P 0.70 0.07
50_S 55_R 0.68 0.06
99_K 8_K 0.68 0.06
98_V 56_K 0.67 0.06
8_E 16_R 0.62 0.04
112_F 57_V 0.61 0.04
104_G 17_D 0.61 0.04
79_A 38_A 0.60 0.04
35_I 44_T 0.59 0.04
29_F 59_E 0.59 0.04
45_G 12_S 0.59 0.04
97_R 54_G 0.58 0.04
34_H 40_K 0.58 0.04
73_L 31_V 0.58 0.04
9_R 18_A 0.58 0.04
85_V 29_T 0.57 0.04
94_Y 31_V 0.57 0.04
101_L 10_K 0.57 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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