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OPENSEQ.org
L06 - L09
UniProt: Q5SHQ3 - Q5SLQ1
Length: 328
Sequences: 1508
Seq/Len: 4.63
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dHI 3v2fHIContact Map
2j002j01HI 2j03HIContact Map
4kix4kixGH 4kizGH 4kj1GH 4kj3GHContact Map
4kj54kj5GH 4kj7GH 4kj9GH 4kjbGHContact Map
3uyd3uyeHK 3uygHKContact Map
4gd13r8sGH 3r8tGHContact Map
3knh3kniHI 3knkHIContact Map
3ohc3ohjHI 3ohkHIContact Map
3f1e3f1fHI 3f1hHIContact Map
3ohy3ohzHI 3oi1HIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
83_Y 44_L 0.93 0.01
92_I 1_M 0.82 0.01
29_P 119_P 0.76 0.01
20_A 92_V 0.75 0.01
137_D 32_P 0.74 0.01
59_R 1_M 0.74 0.01
106_T 29_Y 0.70 0.00
136_I 56_K 0.69 0.00
9_I 62_K 0.69 0.00
137_D 27_R 0.67 0.00
80_S 33_R 0.67 0.00
13_K 130_Y 0.65 0.00
23_R 29_Y 0.65 0.00
128_P 33_R 0.65 0.00
13_K 70_E 0.64 0.00
118_P 12_L 0.63 0.00
173_P 4_I 0.63 0.00
70_T 27_R 0.62 0.00
38_S 101_L 0.62 0.00
92_I 47_L 0.62 0.00
37_V 29_Y 0.61 0.00
123_F 92_V 0.61 0.00
122_T 56_K 0.60 0.00
5_G 113_R 0.60 0.00
72_I 31_L 0.60 0.00
166_G 57_R 0.59 0.00
128_P 29_Y 0.59 0.00
70_T 118_K 0.58 0.00
170_R 37_V 0.58 0.00
112_P 26_A 0.57 0.00
18_E 122_E 0.57 0.00
92_I 142_V 0.56 0.00
121_I 126_Y 0.56 0.00
90_K 82_R 0.56 0.00
89_I 81_V 0.56 0.00
178_A 19_V 0.56 0.00
5_G 68_L 0.56 0.00
38_S 40_T 0.56 0.00
63_S 121_K 0.56 0.00
21_P 100_A 0.56 0.00
153_K 116_L 0.55 0.00
139_Q 49_A 0.55 0.00
84_S 137_P 0.55 0.00
139_Q 22_K 0.55 0.00
45_V 127_V 0.54 0.00
79_V 32_P 0.54 0.00
4_I 105_H 0.54 0.00
143_Q 89_Y 0.54 0.00
166_G 11_N 0.54 0.00
45_V 67_R 0.54 0.00
133_V 38_L 0.54 0.00
92_I 39_A 0.54 0.00
96_A 7_E 0.53 0.00
162_I 139_Q 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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