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OPENSEQ.org
L06 - S18
UniProt: Q5SHQ3 - Q5SLQ0
Length: 268
Sequences: 1279
Seq/Len: 5.18
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cR 3v2dH 3v2eR 3v2fHContact Map
2j002j00R 2j01H 2j02R 2j03HContact Map
4juw4juwR 4juxHContact Map
4kix4kixG 4kiyR 4kizG 4kj0R 4kj1G 4kj2R 4kj3G 4kj4RContact Map
4kj54kj5G 4kj6R 4kj7G 4kj8R 4kj9G 4kjaR 4kjbG 4kjcRContact Map
3knh3knhR 3kniH 3knjR 3knkHContact Map
3ohc3ohcR 3ohdR 3ohjH 3ohkHContact Map
3uz63uz6U 3uz7U 3uz8H 3uz9HContact Map
3oge3ogeR 3ogyR 3oh5H 3oh7HContact Map
3uyd3uydU 3uyeH 3uyfU 3uygHContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
176_A 53_R 0.84 0.00
72_I 73_A 0.76 0.00
92_I 82_T 0.70 0.00
105_L 19_K 0.69 0.00
176_A 58_L 0.67 0.00
174_G 47_T 0.65 0.00
80_S 77_G 0.65 0.00
87_L 81_F 0.64 0.00
125_V 68_K 0.63 0.00
50_V 73_A 0.62 0.00
4_I 53_R 0.60 0.00
171_L 59_S 0.60 0.00
92_I 58_L 0.58 0.00
123_F 82_T 0.57 0.00
122_T 67_A 0.56 0.00
112_P 65_I 0.56 0.00
118_P 18_R 0.55 0.00
148_I 48_G 0.55 0.00
99_V 46_E 0.55 0.00
67_L 23_K 0.54 0.00
6_R 26_L 0.54 0.00
170_R 51_L 0.53 0.00
92_I 52_P 0.53 0.00
150_A 52_P 0.53 0.00
114_V 66_L 0.53 0.00
32_E 56_T 0.53 0.00
38_S 25_T 0.53 0.00
179_K 48_G 0.52 0.00
173_P 53_R 0.52 0.00
48_G 19_K 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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