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OPENSEQ.org
L06 - L11
UniProt: Q5SHQ3 - Q5SLP6
Length: 327
Sequences: 1581
Seq/Len: 4.99
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoEIContact Map
1vq81vq8EIContact Map
1vqp1vqpEIContact Map
1vqm1vqmEIContact Map
1vql1vqlEIContact Map
1vqk1vqkEIContact Map
1yhq1yhqEIContact Map
1s721s72EIContact Map
1vq91vq9EIContact Map
1vqn1vqnEIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
162_I 69_T 0.86 0.00
173_P 6_A 0.74 0.00
173_P 97_G 0.72 0.00
95_R 4_V 0.68 0.00
176_A 112_M 0.65 0.00
70_T 55_V 0.65 0.00
81_E 85_E 0.64 0.00
155_S 44_A 0.61 0.00
99_V 59_I 0.60 0.00
52_V 75_S 0.60 0.00
162_I 136_V 0.58 0.00
94_Y 7_V 0.58 0.00
178_A 38_V 0.58 0.00
134_S 16_K 0.56 0.00
86_E 138_V 0.56 0.00
13_K 7_V 0.56 0.00
68_T 63_R 0.54 0.00
176_A 76_Y 0.54 0.00
153_K 110_Q 0.54 0.00
77_K 121_E 0.53 0.00
141_V 117_T 0.53 0.00
48_G 104_V 0.52 0.00
65_H 130_S 0.52 0.00
158_H 50_D 0.52 0.00
4_I 64_S 0.52 0.00
80_S 47_N 0.52 0.00
171_L 90_K 0.52 0.00
25_K 98_R 0.51 0.00
41_M 12_L 0.51 0.00
176_A 86_K 0.51 0.00
63_S 133_S 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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