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OPENSEQ.org
L06 - L31
UniProt: Q5SHQ3 - Q5SJE1
Length: 251
Sequences: 1397
Seq/Len: 5.75
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dH4 3v2fH4Contact Map
2j002j01H4 2j03H4Contact Map
4juw4juxH4Contact Map
4btc4btdH4Contact Map
3uyd3uyeH4 3uygH4Contact Map
3ohc3ohjH4 3ohkH4Contact Map
3knh3kniH4 3knkH4Contact Map
3ohy3ohzH4 3oi1H4Contact Map
3v223v23H4 3v25H4Contact Map
3uz63uz8H4 3uz9H4Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
5_G 62_R 0.71 0.00
146_A 64_G 0.69 0.00
4_I 27_T 0.69 0.00
89_I 62_R 0.68 0.00
114_V 25_Y 0.65 0.00
59_R 60_Q 0.63 0.00
126_P 53_E 0.61 0.00
35_V 63_Y 0.61 0.00
123_F 56_V 0.60 0.00
173_P 63_Y 0.59 0.00
119_E 4_G 0.58 0.00
117_P 34_E 0.58 0.00
176_A 57_E 0.58 0.00
178_A 48_R 0.57 0.00
9_I 30_E 0.57 0.00
69_R 44_T 0.56 0.00
113_V 56_V 0.56 0.00
51_R 33_V 0.56 0.00
89_I 57_E 0.56 0.00
62_K 57_E 0.53 0.00
41_M 49_F 0.53 0.00
121_I 30_E 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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