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OPENSEQ.org
L06 - L30
UniProt: Q5SHQ3 - Q5SHQ6
Length: 240
Sequences: 1113
Seq/Len: 4.70
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoEWContact Map
1vq81vq8EWContact Map
1vqp1vqpEWContact Map
1vqm1vqmEWContact Map
1vql1vqlEWContact Map
1vqk1vqkEWContact Map
1yhq1yhqEWContact Map
1s721s72EWContact Map
1vq91vq9EWContact Map
1vqn1vqnEWContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
7_L 53_L 0.89 0.00
75_A 35_R 0.72 0.00
174_G 52_H 0.69 0.00
81_E 54_V 0.66 0.00
139_Q 14_G 0.65 0.00
92_I 32_Q 0.65 0.00
169_V 32_Q 0.64 0.00
26_V 56_V 0.63 0.00
65_H 25_A 0.61 0.00
118_P 5_K 0.60 0.00
147_N 19_Q 0.60 0.00
176_A 40_T 0.59 0.00
107_V 54_V 0.59 0.00
89_I 51_A 0.58 0.00
171_L 50_V 0.58 0.00
52_V 50_V 0.57 0.00
32_E 54_V 0.57 0.00
88_L 52_H 0.56 0.00
89_I 37_L 0.56 0.00
166_G 52_H 0.55 0.00
9_I 38_E 0.55 0.00
169_V 51_A 0.55 0.00
20_A 4_L 0.55 0.00
126_P 29_R 0.55 0.00
147_N 16_P 0.54 0.00
132_R 29_R 0.54 0.00
67_L 16_P 0.53 0.00
56_S 49_K 0.53 0.00
29_P 32_Q 0.53 0.00
5_G 52_H 0.52 0.00
43_V 8_L 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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