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OPENSEQ.org
L06 - L24
UniProt: Q5SHQ3 - Q5SHP9
Length: 290
Sequences: 1498
Seq/Len: 5.33
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dHY 3v2fHYContact Map
2j002j01HY 2j03HYContact Map
4juw4juxHYContact Map
4kix4kixGU 4kizGU 4kj1GU 4kj3GUContact Map
4kj54kj5GU 4kj7GU 4kj9GU 4kjbGUContact Map
2zjr2zjrERContact Map
4btc4btdHYContact Map
3uyd3uyeHU 3uygHUContact Map
4gd13r8sGU 3r8tGUContact Map
3knh3kniHY 3knkHYContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
5_G 76_C 0.81 0.00
67_L 46_K 0.71 0.00
85_K 106_L 0.64 0.00
115_V 46_K 0.62 0.00
64_L 48_A 0.60 0.00
76_V 103_G 0.58 0.00
113_V 96_I 0.56 0.00
11_V 61_I 0.55 0.00
135_G 37_V 0.55 0.00
83_Y 59_G 0.54 0.00
88_L 64_E 0.54 0.00
106_T 26_K 0.53 0.00
171_L 87_K 0.52 0.00
116_E 28_K 0.51 0.00
32_E 77_P 0.51 0.00
90_K 88_K 0.50 0.00
131_V 100_A 0.50 0.00
115_V 71_K 0.50 0.00
165_A 75_I 0.49 0.00
155_S 30_V 0.49 0.00
97_R 77_P 0.48 0.00
174_G 83_T 0.48 0.00
174_G 99_C 0.48 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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