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OPENSEQ.org
L06 - L14
UniProt: Q5SHQ3 - Q5SHP8
Length: 302
Sequences: 1603
Seq/Len: 5.34
I_Prob: 0.06
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoEKContact Map
1vq81vq8EKContact Map
1vqp1vqpEKContact Map
1vqm1vqmEKContact Map
1vql1vqlEKContact Map
1vqk1vqkEKContact Map
1yhq1yhqEKContact Map
1s721s72EKContact Map
1vq91vq9EKContact Map
1vqn1vqnEKContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
11_V 39_I 1.07 0.06
52_V 109_K 0.76 0.02
25_K 43_V 0.70 0.02
39_P 86_I 0.69 0.02
145_A 96_T 0.69 0.02
35_V 103_A 0.69 0.02
62_K 14_T 0.67 0.02
63_S 76_A 0.66 0.02
109_F 22_I 0.65 0.01
177_G 49_R 0.65 0.01
55_P 29_N 0.65 0.01
11_V 7_Y 0.64 0.01
155_S 98_V 0.64 0.01
95_R 84_A 0.64 0.01
63_S 73_D 0.63 0.01
41_M 61_V 0.63 0.01
173_P 81_D 0.63 0.01
170_R 90_Q 0.61 0.01
6_R 92_E 0.61 0.01
142_G 104_R 0.60 0.01
149_R 119_P 0.60 0.01
39_P 109_K 0.60 0.01
7_L 39_I 0.60 0.01
70_T 66_K 0.59 0.01
50_V 63_V 0.59 0.01
178_A 4_P 0.58 0.01
104_E 89_N 0.58 0.01
81_E 77_I 0.58 0.01
27_K 117_L 0.57 0.01
61_H 51_A 0.57 0.01
141_V 61_V 0.56 0.01
6_R 14_T 0.56 0.01
176_A 91_L 0.55 0.01
66_G 97_R 0.55 0.01
30_K 59_K 0.55 0.01
87_L 23_R 0.55 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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