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OPENSEQ.org
L06 - S19
UniProt: Q5SHQ3 - Q5SHP2
Length: 273
Sequences: 1679
Seq/Len: 6.29
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cS 3v2dH 3v2eS 3v2fHContact Map
2j002j00S 2j01H 2j02S 2j03HContact Map
4juw4juwS 4juxHContact Map
4kix4kixG 4kiyS 4kizG 4kj0S 4kj1G 4kj2S 4kj3G 4kj4SContact Map
4kj54kj5G 4kj6S 4kj7G 4kj8S 4kj9G 4kjaS 4kjbG 4kjcSContact Map
3ohc3ohcS 3ohdS 3ohjH 3ohkHContact Map
3knh3knhS 3kniH 3knjS 3knkHContact Map
3uz63uz6V 3uz7V 3uz8H 3uz9HContact Map
3oge3ogeS 3ogyS 3oh5H 3oh7HContact Map
3uyd3uydV 3uyeH 3uyfV 3uygHContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
98_L 45_V 0.81 0.00
98_L 53_N 0.78 0.00
137_D 53_N 0.78 0.00
126_P 57_H 0.73 0.00
68_T 66_M 0.72 0.00
112_P 44_M 0.67 0.00
117_P 53_N 0.67 0.00
59_R 65_N 0.67 0.00
56_S 31_I 0.66 0.00
80_S 29_R 0.65 0.00
115_V 63_T 0.65 0.00
55_P 81_R 0.63 0.00
170_R 5_L 0.63 0.00
38_S 2_P 0.61 0.00
67_L 52_Y 0.61 0.00
37_V 41_V 0.61 0.00
170_R 45_V 0.61 0.00
35_V 65_N 0.60 0.00
39_P 43_E 0.60 0.00
125_V 76_P 0.60 0.00
41_M 25_K 0.59 0.00
126_P 65_N 0.59 0.00
143_Q 45_V 0.59 0.00
72_I 37_R 0.58 0.00
110_S 35_S 0.58 0.00
141_V 11_V 0.57 0.00
92_I 46_G 0.57 0.00
25_K 60_V 0.55 0.00
130_R 2_P 0.55 0.00
72_I 82_G 0.55 0.00
170_R 19_V 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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