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OPENSEQ.org
L06 - S10
UniProt: Q5SHQ3 - Q5SHN7
Length: 285
Sequences: 1490
Seq/Len: 5.36
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cJ 3v2dH 3v2eJ 3v2fHContact Map
2j002j00J 2j01H 2j02J 2j03HContact Map
4juw4juwJ 4juxHContact Map
4kix4kixG 4kiyJ 4kizG 4kj0J 4kj1G 4kj2J 4kj3G 4kj4JContact Map
4kj54kj5G 4kj6J 4kj7G 4kj8J 4kj9G 4kjaJ 4kjbG 4kjcJContact Map
3ohc3ohcJ 3ohdJ 3ohjH 3ohkHContact Map
3knh3knhJ 3kniH 3knjJ 3knkHContact Map
3uz63uz6M 3uz7M 3uz8H 3uz9HContact Map
3u5b3u5cU 3u5eH 3u5gU 3u5iHContact Map
3oge3ogeJ 3ogyJ 3oh5H 3oh7HContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
38_S 56_H 0.90 0.01
67_L 92_T 0.85 0.01
128_P 38_I 0.83 0.01
176_A 10_G 0.82 0.01
153_K 87_T 0.81 0.01
38_S 43_R 0.80 0.01
54_R 40_L 0.78 0.00
62_K 91_P 0.78 0.00
170_R 72_V 0.77 0.00
146_A 30_S 0.74 0.00
107_V 12_D 0.73 0.00
173_P 27_A 0.72 0.00
44_V 38_I 0.72 0.00
67_L 14_K 0.71 0.00
92_I 93_G 0.70 0.00
174_G 63_F 0.69 0.00
42_R 91_P 0.69 0.00
166_G 38_I 0.69 0.00
25_K 75_I 0.67 0.00
33_L 42_T 0.67 0.00
32_E 35_S 0.66 0.00
59_R 49_V 0.66 0.00
122_T 28_R 0.66 0.00
174_G 59_S 0.64 0.00
174_G 51_R 0.64 0.00
138_K 42_T 0.64 0.00
11_V 21_Q 0.63 0.00
20_A 33_Q 0.62 0.00
55_P 91_P 0.61 0.00
117_P 53_P 0.61 0.00
41_M 46_R 0.61 0.00
104_E 27_A 0.61 0.00
6_R 96_I 0.61 0.00
173_P 28_R 0.60 0.00
95_R 8_L 0.60 0.00
173_P 53_P 0.60 0.00
104_E 10_G 0.58 0.00
106_T 63_F 0.58 0.00
118_P 87_T 0.58 0.00
105_L 92_T 0.58 0.00
63_S 65_L 0.58 0.00
17_V 47_F 0.58 0.00
104_E 55_K 0.56 0.00
29_P 51_R 0.56 0.00
123_F 50_I 0.56 0.00
60_R 43_R 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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