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OPENSEQ.org
L06 - S20
UniProt: Q5SHQ3 - P80380
Length: 286
Sequences: 1366
Seq/Len: 5.17
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cT 3v2dH 3v2eT 3v2fHContact Map
2j002j00T 2j01H 2j02T 2j03HContact Map
4juw4juwT 4juxHContact Map
4kix4kixG 4kiyT 4kizG 4kj0T 4kj1G 4kj2T 4kj3G 4kj4TContact Map
4kj54kj5G 4kj6T 4kj7G 4kj8T 4kj9G 4kjaT 4kjbG 4kjcTContact Map
3knh3knhT 3kniH 3knjT 3knkHContact Map
3ohc3ohcT 3ohdT 3ohjH 3ohkHContact Map
3uz63uz6W 3uz7W 3uz8H 3uz9HContact Map
3oge3ogeT 3ogyT 3oh5H 3oh7HContact Map
3uyd3uydW 3uyeH 3uyfW 3uygHContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
9_I 47_G 0.92 0.01
176_A 40_A 0.90 0.01
177_G 40_A 0.71 0.01
92_I 32_A 0.67 0.00
173_P 40_A 0.67 0.00
75_A 75_N 0.66 0.00
72_I 44_A 0.65 0.00
52_V 73_H 0.65 0.00
30_K 16_H 0.63 0.00
165_A 31_S 0.62 0.00
95_R 15_R 0.62 0.00
170_R 33_I 0.62 0.00
107_V 77_A 0.58 0.00
137_D 37_S 0.58 0.00
63_S 77_A 0.57 0.00
178_A 16_H 0.56 0.00
144_V 17_R 0.56 0.00
54_R 73_H 0.56 0.00
70_T 33_I 0.54 0.00
125_V 11_S 0.54 0.00
165_A 45_Q 0.54 0.00
130_R 38_K 0.54 0.00
140_K 32_A 0.53 0.00
7_L 34_K 0.53 0.00
105_L 12_A 0.53 0.00
173_P 29_K 0.53 0.00
113_V 51_E 0.53 0.00
166_G 54_K 0.52 0.00
81_E 42_Q 0.52 0.00
50_V 74_K 0.52 0.00
173_P 56_M 0.52 0.00
38_S 16_H 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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