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OPENSEQ.org
L06 - L28
UniProt: Q5SHQ3 - P60494
Length: 278
Sequences: 1200
Seq/Len: 4.96
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dH1 3v2fH1Contact Map
2j002j01H1 2j03H1Contact Map
4juw4juxH1Contact Map
4kix4kixGX 4kizGX 4kj1GX 4kj3GXContact Map
4kj54kj5GX 4kj7GX 4kj9GX 4kjbGXContact Map
2zjr2zjrEUContact Map
4btc4btdH1Contact Map
3uyd3uyeHZ 3uygHZContact Map
4gd13r8sGX 3r8tGXContact Map
3ohc3ohjH1 3ohkH1Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
95_R 35_T 0.90 0.01
113_V 20_R 0.79 0.00
98_L 46_L 0.68 0.00
153_K 64_A 0.67 0.00
177_G 42_Q 0.66 0.00
141_V 67_I 0.65 0.00
16_S 4_V 0.64 0.00
11_V 59_T 0.63 0.00
42_R 39_K 0.62 0.00
174_G 49_V 0.61 0.00
122_T 59_T 0.60 0.00
139_Q 40_R 0.60 0.00
92_I 38_S 0.59 0.00
136_I 68_P 0.58 0.00
46_E 6_E 0.57 0.00
133_V 11_R 0.57 0.00
21_P 37_I 0.56 0.00
87_L 16_N 0.55 0.00
74_N 18_I 0.55 0.00
133_V 67_I 0.55 0.00
166_G 49_V 0.54 0.00
83_Y 39_K 0.54 0.00
178_A 46_L 0.54 0.00
72_I 46_L 0.53 0.00
128_P 68_P 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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