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OPENSEQ.org
S14 - S20
UniProt: Q5SHQ1 - P80380
Length: 167
Sequences: 1251
Seq/Len: 8.51
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeNTContact Map
3v2c3v2cNT 3v2eNTContact Map
2uub2uubNTContact Map
2j002j00NT 2j02NTContact Map
3t1y3t1yNTContact Map
4juw4juwNTContact Map
2uua2uuaNTContact Map
4b3m4b3mNTContact Map
2uxc2uxcNTContact Map
4kix4kiyNT 4kj0NT 4kj2NT 4kj4NTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
31_R 9_N 0.88 0.01
37_F 81_K 0.87 0.01
38_G 34_K 0.78 0.00
56_V 66_A 0.75 0.00
37_F 64_D 0.73 0.00
29_R 79_R 0.71 0.00
33_V 86_R 0.70 0.00
57_R 89_R 0.69 0.00
18_V 23_R 0.66 0.00
53_L 56_M 0.65 0.00
24_C 12_A 0.60 0.00
53_L 16_H 0.60 0.00
31_R 42_Q 0.59 0.00
22_T 61_S 0.59 0.00
42_I 73_H 0.58 0.00
59_A 75_N 0.57 0.00
33_V 82_S 0.57 0.00
53_L 61_S 0.57 0.00
53_L 92_L 0.57 0.00
5_A 27_K 0.56 0.00
27_C 66_A 0.56 0.00
18_V 65_K 0.56 0.00
59_A 27_K 0.56 0.00
33_V 66_A 0.55 0.00
26_R 86_R 0.54 0.00
32_S 91_L 0.54 0.00
31_R 26_N 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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