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OPENSEQ.org
L05 - L24
UniProt: Q5SHQ0 - Q5SHP9
Length: 292
Sequences: 1301
Seq/Len: 4.65
I_Prob: 0.06
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dGY 3v2fGYContact Map
2j002j01GY 2j03GYContact Map
4juw4juxGYContact Map
4kix4kixFU 4kizFU 4kj1FU 4kj3FUContact Map
4kj54kj5FU 4kj7FU 4kj9FU 4kjbFUContact Map
2zjr2zjrDRContact Map
4btc4btdGYContact Map
3uyd3uyeGU 3uygGUContact Map
4gd13r8sFU 3r8tFUContact Map
3knh3kniGY 3knkGYContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
131_Y 40_E 1.07 0.06
21_R 22_G 0.97 0.04
49_D 73_R 0.80 0.02
60_L 23_R 0.77 0.02
33_R 66_P 0.71 0.02
170_R 103_G 0.70 0.02
177_G 17_S 0.68 0.02
34_L 54_K 0.68 0.02
137_E 43_N 0.68 0.01
104_E 35_Y 0.67 0.01
142_P 51_V 0.66 0.01
76_S 59_G 0.65 0.01
164_E 27_V 0.65 0.01
43_L 41_G 0.64 0.01
72_R 50_R 0.63 0.01
81_K 60_F 0.62 0.01
77_I 103_G 0.62 0.01
120_L 57_Q 0.62 0.01
53_L 64_E 0.61 0.01
90_L 94_K 0.59 0.01
27_N 107_D 0.58 0.01
48_E 46_K 0.57 0.01
73_A 102_C 0.57 0.01
106_L 65_A 0.56 0.01
78_S 87_K 0.56 0.01
45_E 27_V 0.55 0.01
68_P 69_A 0.55 0.01
103_L 21_K 0.55 0.01
78_S 95_K 0.53 0.01
86_M 8_K 0.53 0.01
47_K 63_K 0.52 0.01
155_M 60_F 0.52 0.01
85_G 64_E 0.52 0.01
149_V 66_P 0.52 0.01
14_E 102_C 0.52 0.01
55_K 80_G 0.52 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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