OPENSEQ.org
L05 - S03
UniProt: Q5SHQ0 - P80372
Length: 421
Sequences: 1280
Seq/Len: 3.30
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cC 3v2dG 3v2eC 3v2fGContact Map
2j002j00C 2j01G 2j02C 2j03GContact Map
4juw4juwC 4juxGContact Map
4kix4kixF 4kiyC 4kizF 4kj0C 4kj1F 4kj2C 4kj3F 4kj4CContact Map
4kj54kj5F 4kj6C 4kj7F 4kj8C 4kj9F 4kjaC 4kjbF 4kjcCContact Map
3ohc3ohcC 3ohdC 3ohjG 3ohkGContact Map
3knh3knhC 3kniG 3knjC 3knkGContact Map
3uz63uz6F 3uz7F 3uz8G 3uz9GContact Map
3u5b3u5cD 3u5eJ 3u5gD 3u5iJContact Map
3oge3ogeC 3ogyC 3oh5G 3oh7GContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
82_L 83_R 0.90 0.00
108_N 5_I 0.89 0.00
49_D 209_G 0.88 0.00
178_F 118_Q 0.85 0.00
155_M 163_A 0.85 0.00
150_D 162_Q 0.81 0.00
100_W 158_G 0.81 0.00
5_V 82_E 0.81 0.00
33_R 111_L 0.80 0.00
107_L 19_E 0.77 0.00
174_E 91_L 0.77 0.00
77_I 151_V 0.77 0.00
152_L 143_E 0.76 0.00
140_I 42_L 0.76 0.00
138_Q 61_A 0.75 0.00
49_D 83_R 0.74 0.00
118_R 88_R 0.74 0.00
34_L 5_I 0.74 0.00
10_K 93_K 0.74 0.00
149_V 196_L 0.74 0.00
53_L 6_H 0.73 0.00
159_V 10_F 0.73 0.00
59_E 203_F 0.73 0.00
72_R 45_K 0.73 0.00
105_K 75_V 0.73 0.00
64_T 92_A 0.72 0.00
146_Y 61_A 0.72 0.00
120_L 91_L 0.72 0.00
60_L 154_S 0.71 0.00
151_A 54_R 0.71 0.00
58_Q 38_R 0.71 0.00
101_I 161_E 0.71 0.00
97_D 196_L 0.70 0.00
15_V 109_P 0.70 0.00
149_V 48_Y 0.70 0.00
169_A 15_T 0.69 0.00
178_F 70_V 0.69 0.00
48_E 8_I 0.69 0.00
104_E 106_V 0.68 0.00
151_A 25_G 0.68 0.00
97_D 87_L 0.68 0.00
132_N 5_I 0.68 0.00
91_R 18_W 0.67 0.00
152_L 42_L 0.67 0.00
85_G 198_V 0.67 0.00
181_R 144_S 0.67 0.00
60_L 147_K 0.67 0.00
177_G 94_L 0.67 0.00
76_S 162_Q 0.67 0.00
52_I 136_Q 0.66 0.00
21_R 162_Q 0.66 0.00
123_N 151_V 0.66 0.00
13_E 45_K 0.66 0.00
76_S 118_Q 0.65 0.00
102_F 164_R 0.65 0.00
109_V 122_E 0.65 0.00
35_E 119_R 0.64 0.00
60_L 26_K 0.64 0.00
26_Q 44_E 0.64 0.00
85_G 115_L 0.64 0.00
156_D 131_R 0.64 0.00
18_E 30_R 0.64 0.00
18_E 86_V 0.64 0.00
23_F 52_L 0.63 0.00
159_V 90_E 0.63 0.00
47_K 23_Y 0.63 0.00
169_A 64_V 0.63 0.00
84_K 139_Q 0.63 0.00
159_V 106_V 0.63 0.00
18_E 54_R 0.63 0.00
37_V 126_R 0.63 0.00
164_E 151_V 0.62 0.00
64_T 20_S 0.62 0.00
135_L 165_T 0.62 0.00
133_L 209_G 0.62 0.00
20_I 161_E 0.62 0.00
160_V 129_A 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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