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OPENSEQ.org
L24 - S16
UniProt: Q5SHP9 - Q5SJH3
Length: 198
Sequences: 1380
Seq/Len: 7.38
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cP 3v2dY 3v2eP 3v2fYContact Map
2j002j00P 2j01Y 2j02P 2j03YContact Map
4juw4juwP 4juxYContact Map
4kix4kixU 4kiyP 4kizU 4kj0P 4kj1U 4kj2P 4kj3U 4kj4PContact Map
4kj54kj5U 4kj6P 4kj7U 4kj8P 4kj9U 4kjaP 4kjbU 4kjcPContact Map
3ohc3ohcP 3ohdP 3ohjY 3ohkYContact Map
3knh3knhP 3kniY 3knjP 3knkYContact Map
3uz63uz6S 3uz7S 3uz8U 3uz9UContact Map
3oge3ogeP 3ogyP 3oh5Y 3oh7YContact Map
3uyd3uydS 3uyeU 3uyfS 3uygUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
26_K 75_R 0.76 0.00
47_K 33_I 0.74 0.00
105_A 19_I 0.62 0.00
43_N 74_L 0.61 0.00
67_L 53_V 0.61 0.00
8_K 27_K 0.60 0.00
40_E 18_R 0.59 0.00
49_V 32_Y 0.59 0.00
54_K 61_S 0.57 0.00
52_S 40_D 0.56 0.00
20_Y 13_H 0.55 0.00
59_G 15_P 0.55 0.00
90_L 76_Q 0.54 0.00
54_K 13_H 0.49 0.00
83_T 38_Y 0.49 0.00
103_G 72_R 0.49 0.00
103_G 19_I 0.49 0.00
65_A 6_L 0.49 0.00
47_K 57_R 0.49 0.00
56_P 70_A 0.48 0.00
47_K 9_F 0.47 0.00
80_G 61_S 0.47 0.00
98_V 34_E 0.47 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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