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OPENSEQ.org
L24 - S05
UniProt: Q5SHP9 - Q5SHQ5
Length: 272
Sequences: 1219
Seq/Len: 4.71
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cE 3v2dY 3v2eE 3v2fYContact Map
2j002j00E 2j01Y 2j02E 2j03YContact Map
4juw4juwE 4juxYContact Map
4kix4kixU 4kiyE 4kizU 4kj0E 4kj1U 4kj2E 4kj3U 4kj4EContact Map
4kj54kj5U 4kj6E 4kj7U 4kj8E 4kj9U 4kjaE 4kjbU 4kjcEContact Map
3knh3knhE 3kniY 3knjE 3knkYContact Map
3ohc3ohcE 3ohdE 3ohjY 3ohkYContact Map
3uz63uz6H 3uz7H 3uz8U 3uz9UContact Map
3oge3ogeE 3ogyE 3oh5Y 3oh7YContact Map
3uyd3uydH 3uyeU 3uyfH 3uygUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
48_A 109_I 0.92 0.01
59_G 31_L 0.91 0.01
47_K 12_L 0.91 0.01
23_R 126_R 0.90 0.01
10_G 87_S 0.83 0.01
36_A 110_L 0.74 0.00
8_K 100_V 0.74 0.00
58_G 117_D 0.69 0.00
41_G 78_H 0.68 0.00
36_A 108_A 0.67 0.00
65_A 136_M 0.66 0.00
22_G 117_D 0.65 0.00
33_K 147_D 0.65 0.00
44_I 67_V 0.64 0.00
28_K 137_E 0.63 0.00
26_K 127_N 0.63 0.00
68_H 26_F 0.63 0.00
17_S 106_P 0.62 0.00
88_K 69_V 0.61 0.00
42_V 118_I 0.61 0.00
51_V 112_L 0.61 0.00
68_H 130_N 0.60 0.00
48_A 87_S 0.59 0.00
5_M 127_N 0.59 0.00
42_V 139_L 0.58 0.00
9_K 86_A 0.58 0.00
42_V 148_V 0.58 0.00
57_Q 69_V 0.58 0.00
38_I 53_L 0.58 0.00
23_R 100_V 0.57 0.00
105_A 4_T 0.56 0.00
77_P 118_I 0.56 0.00
27_V 149_E 0.56 0.00
73_R 58_A 0.56 0.00
17_S 11_I 0.56 0.00
46_K 119_L 0.56 0.00
54_K 153_K 0.56 0.00
35_Y 60_Y 0.55 0.00
44_I 9_K 0.55 0.00
33_K 140_R 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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