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OPENSEQ.org
L24 - S19
UniProt: Q5SHP9 - Q5SHP2
Length: 203
Sequences: 1251
Seq/Len: 6.48
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cS 3v2dY 3v2eS 3v2fYContact Map
2j002j00S 2j01Y 2j02S 2j03YContact Map
4juw4juwS 4juxYContact Map
4kix4kixU 4kiyS 4kizU 4kj0S 4kj1U 4kj2S 4kj3U 4kj4SContact Map
4kj54kj5U 4kj6S 4kj7U 4kj8S 4kj9U 4kjaS 4kjbU 4kjcSContact Map
3knh3knhS 3kniY 3knjS 3knkYContact Map
3ohc3ohcS 3ohdS 3ohjY 3ohkYContact Map
3uz63uz6V 3uz7V 3uz8U 3uz9UContact Map
3oge3ogeS 3ogyS 3oh5Y 3oh7YContact Map
3uyd3uydV 3uyeU 3uyfV 3uygUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
8_K 45_V 0.99 0.02
30_V 53_N 0.87 0.02
80_G 45_V 0.75 0.01
105_A 65_N 0.72 0.01
51_V 57_H 0.72 0.01
9_K 39_T 0.69 0.01
107_D 61_Y 0.66 0.01
54_K 44_M 0.64 0.01
9_K 32_K 0.62 0.01
52_S 76_P 0.60 0.01
22_G 28_K 0.59 0.01
48_A 66_M 0.58 0.01
105_A 80_Y 0.58 0.01
54_K 39_T 0.56 0.01
31_L 62_I 0.56 0.01
11_D 48_T 0.55 0.01
50_R 70_K 0.55 0.01
44_I 45_V 0.55 0.01
82_P 52_Y 0.54 0.01
47_K 19_V 0.54 0.01
27_V 50_A 0.54 0.01
9_K 43_E 0.53 0.01
28_K 51_V 0.53 0.01
80_G 75_A 0.53 0.01
98_V 26_G 0.53 0.01
78_A 62_I 0.53 0.01
5_M 57_H 0.53 0.01
49_V 55_K 0.52 0.01
40_E 75_A 0.51 0.01
83_T 30_L 0.51 0.01
44_I 52_Y 0.50 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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