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OPENSEQ.org
L24 - L34
UniProt: Q5SHP9 - P80340
Length: 159
Sequences: 1049
Seq/Len: 7.14
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dY7 3v2fY7Contact Map
2j002j01Y7 2j03Y7Contact Map
4juw4juxY7Contact Map
4kix4kixU2 4kizU2 4kj1U2 4kj3U2Contact Map
4kj54kj5U2 4kj7U2 4kj9U2 4kjbU2Contact Map
2zjr2zjrR2Contact Map
4btc4btdY7Contact Map
3uyd3uyeU7 3uygU7Contact Map
4gd13r8sU2 3r8tU2Contact Map
3knh3kniY7 3knkY7Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
63_K 5_W 0.68 0.00
68_H 3_R 0.67 0.00
60_F 5_W 0.60 0.00
79_C 14_K 0.60 0.00
101_K 32_K 0.60 0.00
95_K 25_P 0.60 0.00
31_L 3_R 0.59 0.00
51_V 16_H 0.58 0.00
15_V 29_K 0.57 0.00
16_A 37_K 0.57 0.00
16_A 30_V 0.57 0.00
24_V 30_V 0.57 0.00
101_K 36_Q 0.56 0.00
10_G 45_A 0.55 0.00
43_N 8_N 0.55 0.00
36_A 9_R 0.55 0.00
103_G 9_R 0.54 0.00
26_K 19_R 0.54 0.00
68_H 22_M 0.53 0.00
47_K 22_M 0.53 0.00
64_E 33_R 0.52 0.00
48_A 16_H 0.52 0.00
10_G 2_K 0.51 0.00
21_K 12_R 0.51 0.00
13_V 38_G 0.51 0.00
67_L 31_L 0.51 0.00
9_K 33_R 0.49 0.00
73_R 11_K 0.49 0.00
65_A 23_R 0.48 0.00
38_I 11_K 0.48 0.00
89_F 20_A 0.47 0.00
14_L 19_R 0.47 0.00
68_H 43_T 0.47 0.00
57_Q 1_M 0.47 0.00
64_E 22_M 0.47 0.00
49_V 20_A 0.47 0.00
31_L 36_Q 0.46 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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