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OPENSEQ.org
L14 - L18
UniProt: Q5SHP8 - Q5SHQ4
Length: 234
Sequences: 1070
Seq/Len: 4.61
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dOS 3v2fOSContact Map
2j002j01OS 2j03OSContact Map
4juw4juxOSContact Map
4kix4kixKO 4kizKO 4kj1KO 4kj3KOContact Map
4kj54kj5KO 4kj7KO 4kj9KO 4kjbKOContact Map
2zjr2zjrHLContact Map
4btc4btdOSContact Map
3uyd3uyeNQ 3uygNQContact Map
4gd13r8sKO 3r8tKOContact Map
3ohc3ohjOS 3ohkOSContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
59_K 86_A 0.96 0.01
39_I 33_K 0.93 0.01
11_A 99_K 0.85 0.01
54_E 77_A 0.85 0.01
23_R 108_G 0.78 0.01
42_S 28_V 0.77 0.01
14_T 55_A 0.76 0.01
56_D 26_L 0.76 0.01
78_R 40_I 0.76 0.01
4_P 99_K 0.76 0.01
91_L 13_R 0.75 0.01
29_N 32_L 0.73 0.01
83_A 102_A 0.72 0.01
31_K 27_S 0.71 0.01
33_A 32_L 0.71 0.01
52_V 37_A 0.71 0.01
2_I 10_R 0.70 0.01
45_E 32_L 0.70 0.01
111_F 71_R 0.70 0.01
109_K 39_I 0.69 0.01
35_V 18_I 0.68 0.01
55_G 45_G 0.68 0.01
6_T 84_Q 0.67 0.01
86_I 9_R 0.66 0.01
111_F 34_H 0.65 0.01
98_V 63_T 0.65 0.01
19_I 71_R 0.64 0.01
110_G 8_E 0.64 0.01
43_V 24_L 0.64 0.01
6_T 8_E 0.64 0.01
16_A 30_R 0.63 0.01
80_D 13_R 0.63 0.01
109_K 31_S 0.63 0.01
86_I 64_E 0.63 0.01
25_L 9_R 0.62 0.01
73_D 45_G 0.62 0.01
95_G 103_E 0.61 0.00
14_T 90_G 0.61 0.00
84_A 59_K 0.61 0.00
62_V 103_E 0.60 0.00
17_R 16_N 0.60 0.00
14_T 95_H 0.60 0.00
14_T 93_K 0.59 0.00
17_R 14_V 0.59 0.00
55_G 92_Y 0.59 0.00
103_A 24_L 0.59 0.00
24_V 81_G 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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