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OPENSEQ.org
L14 - L24
UniProt: Q5SHP8 - Q5SHP9
Length: 232
Sequences: 1157
Seq/Len: 5.17
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dOY 3v2fOYContact Map
2j002j01OY 2j03OYContact Map
4juw4juxOYContact Map
4kix4kixKU 4kizKU 4kj1KU 4kj3KUContact Map
4kj54kj5KU 4kj7KU 4kj9KU 4kjbKUContact Map
2zjr2zjrHRContact Map
4btc4btdOYContact Map
3uyd3uyeNU 3uygNUContact Map
4gd13r8sKU 3r8tKUContact Map
3ohc3ohjOY 3ohkOYContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
96_T 48_A 0.74 0.00
47_I 30_V 0.74 0.00
114_I 48_A 0.72 0.00
86_I 101_K 0.71 0.00
113_K 89_F 0.70 0.00
113_K 12_T 0.69 0.00
86_I 90_L 0.68 0.00
41_A 37_V 0.67 0.00
72_P 66_P 0.67 0.00
93_P 72_V 0.65 0.00
14_T 29_E 0.63 0.00
34_T 29_E 0.60 0.00
17_R 103_G 0.60 0.00
109_K 83_T 0.59 0.00
66_K 85_V 0.58 0.00
17_R 49_V 0.58 0.00
77_I 83_T 0.58 0.00
39_I 9_K 0.58 0.00
72_P 87_K 0.58 0.00
55_G 59_G 0.58 0.00
43_V 30_V 0.57 0.00
58_V 69_A 0.56 0.00
119_P 15_V 0.56 0.00
53_K 47_K 0.56 0.00
98_V 16_A 0.56 0.00
45_E 94_K 0.56 0.00
18_K 47_K 0.56 0.00
62_V 63_K 0.55 0.00
72_P 80_G 0.55 0.00
16_A 48_A 0.55 0.00
7_Y 69_A 0.54 0.00
67_K 26_K 0.54 0.00
40_V 12_T 0.54 0.00
14_T 104_G 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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