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OPENSEQ.org
L14 - S12
UniProt: Q5SHP8 - Q5SHN3
Length: 254
Sequences: 824
Seq/Len: 3.34
I_Prob: 0.72
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cL 3v2dO 3v2eL 3v2fOContact Map
2j002j00L 2j01O 2j02L 2j03OContact Map
4juw4juwL 4juxOContact Map
4kix4kixK 4kiyL 4kizK 4kj0L 4kj1K 4kj2L 4kj3K 4kj4LContact Map
4kj54kj5K 4kj6L 4kj7K 4kj8L 4kj9K 4kjaL 4kjbK 4kjcLContact Map
3ohc3ohcL 3ohdL 3ohjO 3ohkOContact Map
3knh3knhL 3kniO 3knjL 3knkOContact Map
3uz63uz6O 3uz7O 3uz8N 3uz9NContact Map
3oge3ogeL 3ogyL 3oh5O 3oh7OContact Map
3uyd3uydO 3uyeN 3uyfO 3uygNContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
110_G 70_E 1.47 0.72
21_C 27_A 1.31 0.58
94_R 65_A 1.27 0.55
108_E 65_A 1.26 0.54
92_E 40_V 1.20 0.48
7_Y 104_A 1.16 0.44
102_V 33_V 1.16 0.43
92_E 38_R 1.09 0.37
76_A 11_G 1.07 0.35
101_P 88_K 1.02 0.31
89_N 113_S 1.01 0.30
94_R 98_V 1.01 0.29
72_P 98_V 1.00 0.29
20_M 61_Y 0.97 0.26
77_I 120_K 0.95 0.24
109_K 68_P 0.93 0.23
112_M 4_I 0.92 0.22
98_V 88_K 0.91 0.21
109_K 10_K 0.91 0.21
29_N 16_R 0.90 0.21
29_N 104_A 0.90 0.20
88_N 40_V 0.87 0.18
110_G 16_R 0.86 0.18
34_T 17_K 0.86 0.18
122_L 82_I 0.86 0.17
23_R 5_N 0.85 0.17
109_K 25_K 0.85 0.17
21_C 38_R 0.83 0.16
28_S 36_V 0.82 0.15
29_N 15_V 0.82 0.15
38_V 5_N 0.81 0.15
86_I 17_K 0.81 0.14
101_P 23_A 0.81 0.14
96_T 102_Y 0.79 0.13
86_I 111_K 0.78 0.13
109_K 121_K 0.78 0.12
4_P 119_T 0.77 0.12
109_K 17_K 0.77 0.12
89_N 101_V 0.77 0.12
90_Q 68_P 0.77 0.12
79_F 33_V 0.77 0.12
111_F 113_S 0.77 0.12
67_K 15_V 0.75 0.11
89_N 16_R 0.73 0.10
42_S 53_A 0.73 0.10
6_T 122_P 0.73 0.10
73_D 82_I 0.73 0.10
41_A 104_A 0.73 0.10
109_K 65_A 0.72 0.10
84_A 101_V 0.72 0.10
81_D 101_V 0.71 0.09
66_K 121_K 0.71 0.09
14_T 54_K 0.71 0.09
109_K 2_P 0.71 0.09
108_E 35_T 0.71 0.09
63_V 83_R 0.70 0.09
45_E 125_A 0.70 0.09
39_I 64_T 0.70 0.09
88_N 5_N 0.70 0.09
59_K 68_P 0.70 0.09
6_T 26_G 0.70 0.09
62_V 30_R 0.69 0.08
53_K 71_G 0.69 0.08
92_E 36_V 0.69 0.08
50_G 21_V 0.69 0.08
75_S 33_V 0.69 0.08
109_K 13_E 0.69 0.08
91_L 14_K 0.69 0.08
72_P 21_V 0.68 0.08
113_K 120_K 0.68 0.08
110_G 13_E 0.68 0.08
91_L 82_I 0.68 0.08
28_S 15_V 0.68 0.08
47_I 19_S 0.68 0.08
45_E 104_A 0.67 0.07
29_N 26_G 0.67 0.07
91_L 13_E 0.66 0.07
29_N 64_T 0.66 0.07
67_K 52_V 0.66 0.07
32_Y 40_V 0.66 0.07
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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