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OPENSEQ.org
L14 - L16
UniProt: Q5SHP8 - P60489
Length: 263
Sequences: 1006
Seq/Len: 3.87
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dOQ 3v2fOQContact Map
2j002j01OQ 2j03OQContact Map
4juw4juxOQContact Map
4kix4kixKM 4kizKM 4kj1KM 4kj3KMContact Map
4kj54kj5KM 4kj7KM 4kj9KM 4kjbKMContact Map
2zjr2zjrHJContact Map
4btc4btdOQContact Map
3uyd3uyeNP 3uygNPContact Map
4gd13r8sKM 3r8tKMContact Map
3ohc3ohjOQ 3ohkOQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
29_N 18_K 1.04 0.03
17_R 22_K 1.00 0.02
90_Q 85_K 0.92 0.02
111_F 63_K 0.92 0.02
42_S 27_V 0.90 0.02
56_D 85_K 0.90 0.02
78_R 133_R 0.87 0.02
17_R 23_G 0.87 0.02
41_A 3_M 0.86 0.02
6_T 5_R 0.84 0.01
94_R 14_R 0.84 0.01
106_L 103_M 0.84 0.01
6_T 79_L 0.83 0.01
84_A 13_Q 0.81 0.01
91_L 125_L 0.81 0.01
61_V 6_R 0.81 0.01
103_A 52_V 0.80 0.01
77_I 57_H 0.79 0.01
32_Y 80_E 0.79 0.01
45_E 74_Y 0.77 0.01
31_K 120_I 0.76 0.01
66_K 135_D 0.76 0.01
110_G 137_Y 0.76 0.01
51_A 41_W 0.76 0.01
72_P 42_I 0.75 0.01
108_E 93_Y 0.74 0.01
63_V 45_Q 0.73 0.01
110_G 135_D 0.73 0.01
14_T 93_Y 0.72 0.01
103_A 118_L 0.72 0.01
51_A 18_K 0.71 0.01
17_R 80_E 0.71 0.01
3_Q 60_R 0.71 0.01
55_G 78_P 0.71 0.01
17_R 119_R 0.70 0.01
55_G 77_K 0.70 0.01
70_K 122_G 0.70 0.01
92_E 137_Y 0.69 0.01
103_A 13_Q 0.69 0.01
47_I 7_M 0.68 0.01
65_T 29_F 0.67 0.01
89_N 107_A 0.67 0.01
42_S 33_G 0.67 0.01
8_L 63_K 0.67 0.01
25_L 1_M 0.67 0.01
52_V 50_A 0.67 0.01
79_F 62_G 0.67 0.01
81_D 23_G 0.67 0.01
103_A 6_R 0.67 0.01
7_Y 135_D 0.67 0.01
17_R 59_R 0.66 0.01
89_N 18_K 0.66 0.01
121_V 8_K 0.66 0.01
9_E 67_R 0.65 0.01
110_G 118_L 0.65 0.01
67_K 136_A 0.64 0.01
14_T 29_F 0.64 0.01
31_K 58_F 0.63 0.01
41_A 111_E 0.63 0.01
103_A 34_L 0.63 0.01
67_K 18_K 0.63 0.01
14_T 92_G 0.62 0.01
98_V 59_R 0.62 0.01
19_I 111_E 0.62 0.01
104_R 78_P 0.62 0.01
103_A 64_I 0.62 0.01
115_V 137_Y 0.61 0.01
14_T 110_T 0.61 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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