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OPENSEQ.org
L22 - S05
UniProt: Q5SHP3 - Q5SHQ5
Length: 275
Sequences: 1339
Seq/Len: 5.00
I_Prob: 0.11
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cE 3v2dW 3v2eE 3v2fWContact Map
2j002j00E 2j01W 2j02E 2j03WContact Map
4juw4juwE 4juxWContact Map
4kix4kixS 4kiyE 4kizS 4kj0E 4kj1S 4kj2E 4kj3S 4kj4EContact Map
4kj54kj5S 4kj6E 4kj7S 4kj8E 4kj9S 4kjaE 4kjbS 4kjcEContact Map
3knh3knhE 3kniW 3knjE 3knkWContact Map
3ohc3ohcE 3ohdE 3ohjW 3ohkWContact Map
3uz63uz6H 3uz7H 3uz8S 3uz9SContact Map
3oge3ogeE 3ogyE 3oh5W 3oh7WContact Map
3uyd3uydH 3uyeS 3uyfH 3uygSContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
105_V 153_K 1.12 0.11
18_R 119_L 0.93 0.06
75_Y 148_V 0.92 0.06
22_D 36_D 0.92 0.06
93_A 41_V 0.84 0.05
10_V 6_F 0.81 0.04
86_L 11_I 0.81 0.04
63_D 8_E 0.80 0.04
29_L 50_E 0.79 0.04
18_R 133_Y 0.77 0.04
101_S 52_P 0.77 0.03
77_D 119_L 0.75 0.03
62_H 150_R 0.75 0.03
4_K 147_D 0.74 0.03
25_R 69_V 0.74 0.03
18_R 34_V 0.73 0.03
92_R 16_T 0.73 0.03
10_V 131_I 0.73 0.03
20_V 36_D 0.73 0.03
59_V 6_F 0.73 0.03
76_V 75_T 0.72 0.03
24_I 36_D 0.71 0.03
2_E 3_E 0.70 0.03
62_H 79_E 0.68 0.03
9_Y 127_N 0.68 0.02
13_S 120_T 0.68 0.02
71_V 148_V 0.67 0.02
59_V 120_T 0.66 0.02
31_E 13_I 0.66 0.02
46_F 19_M 0.65 0.02
31_E 142_L 0.65 0.02
59_V 156_A 0.65 0.02
85_V 117_D 0.65 0.02
14_P 118_I 0.64 0.02
10_V 146_A 0.64 0.02
44_A 118_I 0.64 0.02
16_K 22_G 0.64 0.02
67_D 61_Y 0.63 0.02
38_Y 138_A 0.62 0.02
3_A 41_V 0.62 0.02
18_R 93_P 0.61 0.02
86_L 56_Q 0.61 0.02
94_D 150_R 0.61 0.02
38_Y 59_G 0.60 0.02
100_T 122_E 0.60 0.02
82_L 37_R 0.60 0.02
73_A 6_F 0.60 0.02
105_V 155_E 0.59 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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