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OPENSEQ.org
L22 - S08
UniProt: Q5SHP3 - Q5SHQ2
Length: 251
Sequences: 1593
Seq/Len: 6.58
I_Prob: 0.28
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cH 3v2dW 3v2eH 3v2fWContact Map
2j002j00H 2j01W 2j02H 2j03WContact Map
4juw4juwH 4juxWContact Map
4kix4kixS 4kiyH 4kizS 4kj0H 4kj1S 4kj2H 4kj3S 4kj4HContact Map
4kj54kj5S 4kj6H 4kj7S 4kj8H 4kj9S 4kjaH 4kjbS 4kjcHContact Map
3knh3knhH 3kniW 3knjH 3knkWContact Map
3ohc3ohcH 3ohdH 3ohjW 3ohkWContact Map
3uz63uz6K 3uz7K 3uz8S 3uz9SContact Map
3u5b3u5cW 3u5eP 3u5gW 3u5iPContact Map
3oge3ogeH 3ogyH 3oh5W 3oh7WContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
51_L 86_I 1.19 0.28
95_I 44_F 0.82 0.09
83_K 24_T 0.79 0.07
48_A 119_L 0.79 0.07
90_R 21_K 0.75 0.06
37_R 126_K 0.74 0.06
58_A 42_E 0.73 0.06
69_L 134_I 0.72 0.06
15_R 57_P 0.70 0.05
43_G 136_E 0.69 0.05
63_D 67_P 0.68 0.05
9_Y 105_R 0.67 0.04
92_R 135_C 0.66 0.04
44_A 76_P 0.65 0.04
81_A 55_G 0.63 0.04
97_K 48_Y 0.62 0.04
27_K 97_V 0.62 0.04
70_Y 45_I 0.62 0.04
25_R 11_T 0.62 0.04
70_Y 102_R 0.61 0.04
105_V 116_K 0.61 0.03
75_Y 84_R 0.61 0.03
89_A 40_A 0.60 0.03
44_A 29_S 0.60 0.03
90_R 104_R 0.60 0.03
10_V 136_E 0.59 0.03
88_R 63_L 0.59 0.03
42_R 135_C 0.59 0.03
4_K 104_R 0.58 0.03
37_R 109_I 0.57 0.03
21_V 47_G 0.57 0.03
68_R 86_I 0.57 0.03
106_I 61_V 0.57 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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