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OPENSEQ.org
L22 - L24
UniProt: Q5SHP3 - Q5SHP9
Length: 223
Sequences: 1350
Seq/Len: 6.37
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dWY 3v2fWYContact Map
2j002j01WY 2j03WYContact Map
4juw4juxWYContact Map
4kix4kixSU 4kizSU 4kj1SU 4kj3SUContact Map
4kj54kj5SU 4kj7SU 4kj9SU 4kjbSUContact Map
2zjr2zjrPRContact Map
4btc4btdWYContact Map
3uyd3uyeSU 3uygSUContact Map
4gd13r8sSU 3r8tSUContact Map
3knh3kniWY 3knkWYContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
105_V 15_V 0.69 0.00
24_I 35_Y 0.67 0.00
31_E 16_A 0.66 0.00
33_R 6_H 0.66 0.00
17_V 16_A 0.64 0.00
78_E 63_K 0.64 0.00
70_Y 27_V 0.64 0.00
8_R 84_R 0.63 0.00
43_G 67_L 0.63 0.00
71_V 96_I 0.62 0.00
21_V 73_R 0.60 0.00
56_A 29_E 0.60 0.00
78_E 65_A 0.60 0.00
80_P 42_V 0.59 0.00
1_M 40_E 0.58 0.00
31_E 66_P 0.57 0.00
107_L 16_A 0.57 0.00
96_I 29_E 0.56 0.00
74_A 52_S 0.56 0.00
73_A 29_E 0.56 0.00
43_G 35_Y 0.55 0.00
56_A 10_G 0.55 0.00
105_V 77_P 0.55 0.00
39_T 91_E 0.54 0.00
68_R 30_V 0.54 0.00
89_A 76_C 0.54 0.00
82_L 8_K 0.54 0.00
33_R 71_K 0.53 0.00
94_D 46_K 0.53 0.00
29_L 61_I 0.53 0.00
85_V 38_I 0.52 0.00
38_Y 8_K 0.52 0.00
15_R 51_V 0.51 0.00
24_I 59_G 0.51 0.00
72_K 62_E 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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