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OPENSEQ.org
L22 - S12
UniProt: Q5SHP3 - Q5SHN3
Length: 245
Sequences: 1074
Seq/Len: 4.55
I_Prob: 0.42
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cL 3v2dW 3v2eL 3v2fWContact Map
2j002j00L 2j01W 2j02L 2j03WContact Map
4juw4juwL 4juxWContact Map
4kix4kixS 4kiyL 4kizS 4kj0L 4kj1S 4kj2L 4kj3S 4kj4LContact Map
4kj54kj5S 4kj6L 4kj7S 4kj8L 4kj9S 4kjaL 4kjbS 4kjcLContact Map
3knh3knhL 3kniW 3knjL 3knkWContact Map
3ohc3ohcL 3ohdL 3ohjW 3ohkWContact Map
3uz63uz6O 3uz7O 3uz8S 3uz9SContact Map
3oge3ogeL 3ogyL 3oh5W 3oh7WContact Map
3uyd3uydO 3uyeS 3uyfO 3uygSContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
109_E 5_N 1.28 0.42
18_R 36_V 1.18 0.34
94_D 53_A 0.96 0.18
22_D 18_K 0.89 0.14
51_L 16_R 0.87 0.13
63_D 79_V 0.83 0.11
23_L 11_G 0.81 0.10
77_D 25_K 0.81 0.10
30_E 30_R 0.81 0.10
110_K 30_R 0.80 0.10
52_E 82_I 0.78 0.09
34_N 30_R 0.77 0.09
66_E 70_E 0.76 0.08
76_V 16_R 0.75 0.08
39_T 26_G 0.75 0.08
77_D 40_V 0.74 0.08
39_T 122_P 0.74 0.07
95_I 113_S 0.73 0.07
71_V 122_P 0.73 0.07
86_L 54_K 0.73 0.07
19_L 108_K 0.72 0.07
74_A 56_R 0.72 0.07
89_A 79_V 0.71 0.07
15_R 121_K 0.71 0.07
10_V 17_K 0.71 0.07
10_V 109_D 0.71 0.07
17_V 49_L 0.71 0.07
82_L 20_K 0.70 0.06
28_S 101_V 0.70 0.06
99_R 24_L 0.70 0.06
26_G 102_Y 0.70 0.06
90_R 59_S 0.69 0.06
1_M 113_S 0.69 0.06
88_R 36_V 0.68 0.06
32_A 33_V 0.66 0.05
7_A 80_V 0.66 0.05
63_D 30_R 0.66 0.05
60_N 79_V 0.66 0.05
70_Y 97_I 0.66 0.05
104_T 64_T 0.66 0.05
90_R 5_N 0.66 0.05
73_A 35_T 0.66 0.05
68_R 98_V 0.65 0.05
89_A 61_Y 0.65 0.05
21_V 64_T 0.64 0.05
24_I 19_S 0.64 0.05
34_N 21_V 0.64 0.05
6_I 119_T 0.64 0.05
77_D 36_V 0.64 0.05
59_V 105_A 0.64 0.05
92_R 40_V 0.63 0.05
30_E 58_T 0.63 0.04
12_I 17_K 0.63 0.04
22_D 8_V 0.63 0.04
95_I 13_E 0.63 0.04
88_R 79_V 0.62 0.04
38_Y 104_A 0.61 0.04
19_L 38_R 0.61 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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