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OPENSEQ.org
L22 - S09
UniProt: Q5SHP3 - P80374
Length: 241
Sequences: 1429
Seq/Len: 6.03
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cI 3v2dW 3v2eI 3v2fWContact Map
2j002j00I 2j01W 2j02I 2j03WContact Map
4juw4juwI 4juxWContact Map
4kix4kixS 4kiyI 4kizS 4kj0I 4kj1S 4kj2I 4kj3S 4kj4IContact Map
4kj54kj5S 4kj6I 4kj7S 4kj8I 4kj9S 4kjaI 4kjbS 4kjcIContact Map
3ohc3ohcI 3ohdI 3ohjW 3ohkWContact Map
3knh3knhI 3kniW 3knjI 3knkWContact Map
3uz63uz6L 3uz7L 3uz8S 3uz9SContact Map
3u5b3u5cQ 3u5eP 3u5gQ 3u5iPContact Map
3oge3ogeI 3ogyI 3oh5W 3oh7WContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
5_A 84_A 0.85 0.00
7_A 13_A 0.74 0.00
90_R 118_K 0.71 0.00
46_F 77_I 0.69 0.00
85_V 63_I 0.68 0.00
109_E 6_G 0.68 0.00
89_A 123_P 0.67 0.00
60_N 121_R 0.66 0.00
93_A 126_S 0.65 0.00
61_N 106_A 0.64 0.00
4_K 34_N 0.62 0.00
15_R 65_V 0.62 0.00
78_E 125_Y 0.61 0.00
66_E 90_P 0.61 0.00
110_K 19_L 0.60 0.00
2_E 35_E 0.59 0.00
51_L 81_I 0.59 0.00
20_V 16_R 0.59 0.00
105_V 74_I 0.59 0.00
19_L 3_Q 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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