OPENSEQ.org
L23 - S15
UniProt: Q5SHP0 - Q5SJ76
Length: 185
Sequences: 1365
Seq/Len: 7.54
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cO 3v2dX 3v2eO 3v2fXContact Map
2j002j00O 2j01X 2j02O 2j03XContact Map
4juw4juwO 4juxXContact Map
4kix4kixT 4kiyO 4kizT 4kj0O 4kj1T 4kj2O 4kj3T 4kj4OContact Map
4kj54kj5T 4kj6O 4kj7T 4kj8O 4kj9T 4kjaO 4kjbT 4kjcOContact Map
3ohc3ohcO 3ohdO 3ohjX 3ohkXContact Map
3knh3knhO 3kniX 3knjO 3knkXContact Map
3uz63uz6R 3uz7R 3uz8T 3uz9TContact Map
3oge3ogeO 3ogyO 3oh5X 3oh7XContact Map
3uyd3uydR 3uyeT 3uyfR 3uygTContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
26_Y 43_L 1.00 0.03
85_P 87_I 0.98 0.03
59_V 64_R 0.79 0.02
64_K 51_H 0.75 0.01
25_K 29_V 0.73 0.01
32_P 65_R 0.71 0.01
34_A 68_R 0.69 0.01
23_E 83_E 0.69 0.01
18_Y 1_M 0.68 0.01
9_L 87_I 0.68 0.01
93_E 60_V 0.68 0.01
92_L 79_R 0.67 0.01
60_R 64_R 0.66 0.01
17_A 25_T 0.66 0.01
51_V 29_V 0.65 0.01
21_F 89_G 0.64 0.01
80_I 83_E 0.63 0.01
25_K 12_I 0.62 0.01
78_K 71_Q 0.62 0.01
2_K 59_M 0.62 0.01
72_K 35_R 0.62 0.01
71_G 61_G 0.61 0.01
73_R 89_G 0.61 0.01
76_R 16_A 0.61 0.01
85_P 13_Q 0.60 0.01
85_P 2_P 0.60 0.01
12_V 38_R 0.60 0.01
43_V 41_E 0.60 0.01
74_P 57_L 0.60 0.01
67_G 70_L 0.59 0.01
33_K 80_A 0.58 0.01
60_R 65_R 0.58 0.01
24_G 75_P 0.57 0.01
9_L 35_R 0.56 0.01
14_S 31_L 0.56 0.01
21_F 65_R 0.56 0.01
64_K 10_K 0.56 0.01
63_K 68_R 0.56 0.01
49_V 26_E 0.55 0.01
10_A 61_G 0.55 0.01
4_A 43_L 0.55 0.01
20_G 43_L 0.55 0.01
64_K 27_V 0.54 0.01
55_N 84_K 0.54 0.01
78_K 65_R 0.54 0.01
83_V 21_D 0.54 0.01
94_G 15_F 0.54 0.01
40_K 40_S 0.54 0.01
94_G 64_R 0.54 0.01
23_E 19_P 0.54 0.01
42_A 27_V 0.53 0.01
18_Y 87_I 0.53 0.01
33_K 31_L 0.53 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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