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OPENSEQ.org
L23 - S05
UniProt: Q5SHP0 - Q5SHQ5
Length: 258
Sequences: 1373
Seq/Len: 5.51
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cE 3v2dX 3v2eE 3v2fXContact Map
2j002j00E 2j01X 2j02E 2j03XContact Map
4juw4juwE 4juxXContact Map
4kix4kixT 4kiyE 4kizT 4kj0E 4kj1T 4kj2E 4kj3T 4kj4EContact Map
4kj54kj5T 4kj6E 4kj7T 4kj8E 4kj9T 4kjaE 4kjbT 4kjcEContact Map
3ohc3ohcE 3ohdE 3ohjX 3ohkXContact Map
3knh3knhE 3kniX 3knjE 3knkXContact Map
3uz63uz6H 3uz7H 3uz8T 3uz9TContact Map
3oge3ogeE 3ogyE 3oh5X 3oh7XContact Map
3uyd3uydH 3uyeT 3uyfH 3uygTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
76_R 110_L 0.95 0.01
3_T 59_G 0.92 0.01
44_E 85_G 0.90 0.01
16_K 138_A 0.90 0.01
9_L 126_R 0.89 0.01
62_K 50_E 0.89 0.01
65_R 82_V 0.88 0.01
70_L 155_E 0.87 0.01
44_E 139_L 0.84 0.01
83_V 69_V 0.82 0.01
44_E 58_A 0.81 0.01
56_T 58_A 0.81 0.01
46_A 86_A 0.79 0.01
14_S 53_L 0.79 0.01
57_L 5_D 0.77 0.01
46_A 37_R 0.77 0.01
80_I 13_I 0.77 0.01
24_G 148_V 0.74 0.01
14_S 83_E 0.73 0.01
17_A 148_V 0.72 0.01
32_P 48_A 0.72 0.01
29_W 100_V 0.72 0.01
20_G 113_A 0.69 0.01
5_Y 136_M 0.69 0.01
77_K 127_N 0.69 0.01
32_P 136_M 0.69 0.01
74_P 140_R 0.68 0.01
84_A 36_D 0.68 0.01
49_V 117_D 0.66 0.01
22_A 137_E 0.66 0.01
14_S 56_Q 0.65 0.01
16_K 57_K 0.65 0.01
73_R 151_L 0.64 0.01
87_Q 103_G 0.64 0.01
18_Y 112_L 0.64 0.01
33_K 56_Q 0.64 0.01
70_L 5_D 0.64 0.01
72_K 150_R 0.63 0.01
68_R 10_M 0.63 0.01
91_A 25_R 0.63 0.01
23_E 81_E 0.63 0.01
72_K 146_A 0.62 0.01
86_G 51_V 0.62 0.01
2_K 58_A 0.61 0.01
88_K 88_K 0.61 0.01
15_E 94_A 0.61 0.01
49_V 48_A 0.61 0.01
14_S 24_R 0.61 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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