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OPENSEQ.org
L23 - L24
UniProt: Q5SHP0 - Q5SHP9
Length: 206
Sequences: 1371
Seq/Len: 7.10
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dXY 3v2fXYContact Map
2j002j01XY 2j03XYContact Map
4juw4juxXYContact Map
4kix4kixTU 4kizTU 4kj1TU 4kj3TUContact Map
4kj54kj5TU 4kj7TU 4kj9TU 4kjbTUContact Map
2zjr2zjrQRContact Map
4btc4btdXYContact Map
3uyd3uyeTU 3uygTUContact Map
4gd13r8sTU 3r8tTUContact Map
3ohc3ohjXY 3ohkXYContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
10_A 84_R 0.73 0.00
9_L 6_H 0.69 0.00
34_A 45_V 0.68 0.00
85_P 66_P 0.63 0.00
44_E 48_A 0.62 0.00
71_G 88_K 0.61 0.00
61_G 59_G 0.61 0.00
20_G 107_D 0.61 0.00
85_P 82_P 0.61 0.00
21_F 53_P 0.60 0.00
59_V 56_P 0.59 0.00
10_A 79_C 0.59 0.00
12_V 64_E 0.59 0.00
59_V 62_E 0.57 0.00
78_K 62_E 0.57 0.00
39_I 77_P 0.57 0.00
86_G 47_K 0.55 0.00
72_K 30_V 0.55 0.00
2_K 106_L 0.53 0.00
62_K 67_L 0.53 0.00
35_T 72_V 0.53 0.00
90_E 30_V 0.52 0.00
93_E 80_G 0.52 0.00
16_K 5_M 0.52 0.00
36_K 41_G 0.52 0.00
17_A 73_R 0.52 0.00
22_A 12_T 0.52 0.00
40_K 95_K 0.52 0.00
73_R 72_V 0.52 0.00
60_R 62_E 0.51 0.00
66_L 67_L 0.51 0.00
50_K 38_I 0.51 0.00
61_G 70_S 0.51 0.00
19_A 17_S 0.51 0.00
30_V 27_V 0.51 0.00
51_V 48_A 0.50 0.00
39_I 39_V 0.50 0.00
4_A 82_P 0.50 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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