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OPENSEQ.org
L23 - S09
UniProt: Q5SHP0 - P80374
Length: 224
Sequences: 1451
Seq/Len: 6.66
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cI 3v2dX 3v2eI 3v2fXContact Map
2j002j00I 2j01X 2j02I 2j03XContact Map
4juw4juwI 4juxXContact Map
4kix4kixT 4kiyI 4kizT 4kj0I 4kj1T 4kj2I 4kj3T 4kj4IContact Map
4kj54kj5T 4kj6I 4kj7T 4kj8I 4kj9T 4kjaI 4kjbT 4kjcIContact Map
3ohc3ohcI 3ohdI 3ohjX 3ohkXContact Map
3knh3knhI 3kniX 3knjI 3knkXContact Map
3uz63uz6L 3uz7L 3uz8T 3uz9TContact Map
3u5b3u5cQ 3u5eX 3u5gQ 3u5iXContact Map
3oge3ogeI 3ogyI 3oh5X 3oh7XContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
26_Y 102_L 1.01 0.04
59_V 91_D 1.01 0.04
8_I 89_N 0.94 0.03
22_A 87_Q 0.89 0.03
49_V 82_A 0.77 0.02
57_L 13_A 0.76 0.02
32_P 32_D 0.75 0.02
71_G 60_D 0.73 0.01
14_S 123_P 0.73 0.01
71_G 96_L 0.73 0.01
73_R 118_K 0.72 0.01
87_Q 18_F 0.70 0.01
93_E 42_R 0.70 0.01
76_R 3_Q 0.69 0.01
65_R 75_D 0.69 0.01
81_V 16_R 0.68 0.01
10_A 59_F 0.68 0.01
47_F 6_G 0.67 0.01
72_K 94_A 0.67 0.01
82_Q 23_N 0.67 0.01
72_K 90_P 0.66 0.01
3_T 121_R 0.65 0.01
46_A 45_A 0.65 0.01
77_K 37_F 0.65 0.01
40_K 59_F 0.65 0.01
5_Y 61_A 0.64 0.01
50_K 80_G 0.64 0.01
67_G 106_A 0.64 0.01
53_K 66_R 0.63 0.01
77_K 13_A 0.63 0.01
6_D 122_A 0.63 0.01
3_T 18_F 0.63 0.01
59_V 31_Q 0.62 0.01
55_N 23_N 0.61 0.01
63_K 32_D 0.60 0.01
14_S 70_K 0.60 0.01
18_Y 77_I 0.60 0.01
13_L 92_Y 0.60 0.01
57_L 65_V 0.60 0.01
74_P 58_H 0.60 0.01
90_E 26_V 0.60 0.01
36_K 79_L 0.59 0.01
70_L 23_N 0.59 0.01
50_K 17_V 0.59 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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